Protein–RNA interactions for Protein: Q9JJK5

Herpud1, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herpud1Q9JJK5 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Herpud1Q9JJK5 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Herpud1Q9JJK5 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Herpud1Q9JJK5 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Herpud1Q9JJK5 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Herpud1Q9JJK5 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Herpud1Q9JJK5 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Herpud1Q9JJK5 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Herpud1Q9JJK5 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Herpud1Q9JJK5 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Herpud1Q9JJK5 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Herpud1Q9JJK5 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC17.03■□□□□ 0.32
Herpud1Q9JJK5 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Herpud1Q9JJK5 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Herpud1Q9JJK5 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC17.03■□□□□ 0.32
Herpud1Q9JJK5 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Herpud1Q9JJK5 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC17.03■□□□□ 0.32
Herpud1Q9JJK5 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC17.03■□□□□ 0.32
Herpud1Q9JJK5 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Herpud1Q9JJK5 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Herpud1Q9JJK5 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC17.02■□□□□ 0.32
Herpud1Q9JJK5 Nsd1-203ENSMUST00000224156 1149 ntBASIC17.02■□□□□ 0.32
Herpud1Q9JJK5 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC17.02■□□□□ 0.31
Herpud1Q9JJK5 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Herpud1Q9JJK5 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Herpud1Q9JJK5 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Herpud1Q9JJK5 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Herpud1Q9JJK5 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Herpud1Q9JJK5 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Herpud1Q9JJK5 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Herpud1Q9JJK5 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Herpud1Q9JJK5 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Herpud1Q9JJK5 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC17.01■□□□□ 0.31
Herpud1Q9JJK5 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Herpud1Q9JJK5 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Herpud1Q9JJK5 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Herpud1Q9JJK5 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Herpud1Q9JJK5 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Herpud1Q9JJK5 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Herpud1Q9JJK5 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Herpud1Q9JJK5 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Herpud1Q9JJK5 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC17■□□□□ 0.31
Herpud1Q9JJK5 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC17■□□□□ 0.31
Herpud1Q9JJK5 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC17■□□□□ 0.31
Herpud1Q9JJK5 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Herpud1Q9JJK5 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC17■□□□□ 0.31
Herpud1Q9JJK5 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC17■□□□□ 0.31
Herpud1Q9JJK5 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
Herpud1Q9JJK5 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC17■□□□□ 0.31
Herpud1Q9JJK5 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Herpud1Q9JJK5 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Herpud1Q9JJK5 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Herpud1Q9JJK5 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC17■□□□□ 0.31
Herpud1Q9JJK5 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Herpud1Q9JJK5 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC16.99■□□□□ 0.31
Herpud1Q9JJK5 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Herpud1Q9JJK5 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC16.99■□□□□ 0.31
Herpud1Q9JJK5 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC16.99■□□□□ 0.31
Herpud1Q9JJK5 Gm45444-201ENSMUST00000211394 898 ntBASIC16.99■□□□□ 0.31
Herpud1Q9JJK5 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC16.99■□□□□ 0.31
Herpud1Q9JJK5 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC16.99■□□□□ 0.31
Herpud1Q9JJK5 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Herpud1Q9JJK5 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Herpud1Q9JJK5 Gm15043-201ENSMUST00000118843 1543 ntBASIC16.99■□□□□ 0.31
Herpud1Q9JJK5 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Herpud1Q9JJK5 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Herpud1Q9JJK5 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Herpud1Q9JJK5 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Herpud1Q9JJK5 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Herpud1Q9JJK5 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Herpud1Q9JJK5 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Herpud1Q9JJK5 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Herpud1Q9JJK5 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC16.98■□□□□ 0.31
Herpud1Q9JJK5 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Herpud1Q9JJK5 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Herpud1Q9JJK5 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Herpud1Q9JJK5 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Herpud1Q9JJK5 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Herpud1Q9JJK5 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Herpud1Q9JJK5 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Herpud1Q9JJK5 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Herpud1Q9JJK5 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC16.97■□□□□ 0.31
Herpud1Q9JJK5 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Herpud1Q9JJK5 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Herpud1Q9JJK5 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Herpud1Q9JJK5 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC16.96■□□□□ 0.31
Herpud1Q9JJK5 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Herpud1Q9JJK5 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Herpud1Q9JJK5 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC16.96■□□□□ 0.31
Herpud1Q9JJK5 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Herpud1Q9JJK5 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
Herpud1Q9JJK5 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Herpud1Q9JJK5 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Herpud1Q9JJK5 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Herpud1Q9JJK5 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC16.96■□□□□ 0.31
Herpud1Q9JJK5 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Herpud1Q9JJK5 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Herpud1Q9JJK5 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
Herpud1Q9JJK5 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Herpud1Q9JJK5 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms