Protein–RNA interactions for Protein: Q9D0F1

Ndc80, Kinetochore protein NDC80 homolog, mousemouse

Known RBP Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc80Q9D0F1 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.83■□□□□ 0.93
Ndc80Q9D0F1 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ndc80Q9D0F1 Gm15820-201ENSMUST00000201566 728 ntBASIC20.83■□□□□ 0.93
Ndc80Q9D0F1 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ndc80Q9D0F1 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Ndc80Q9D0F1 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ndc80Q9D0F1 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC20.82■□□□□ 0.92
Ndc80Q9D0F1 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Ndc80Q9D0F1 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Ndc80Q9D0F1 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.82■□□□□ 0.92
Ndc80Q9D0F1 Gm15546-201ENSMUST00000122095 826 ntBASIC20.82■□□□□ 0.92
Ndc80Q9D0F1 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ndc80Q9D0F1 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Ndc80Q9D0F1 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.82■□□□□ 0.92
Ndc80Q9D0F1 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Ndc80Q9D0F1 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Ndc80Q9D0F1 Gm10399-202ENSMUST00000202768 748 ntBASIC20.81■□□□□ 0.92
Ndc80Q9D0F1 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ndc80Q9D0F1 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ndc80Q9D0F1 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.8■□□□□ 0.92
Ndc80Q9D0F1 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.8■□□□□ 0.92
Ndc80Q9D0F1 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Ndc80Q9D0F1 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.8■□□□□ 0.92
Ndc80Q9D0F1 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ndc80Q9D0F1 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.8■□□□□ 0.92
Ndc80Q9D0F1 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ndc80Q9D0F1 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Ndc80Q9D0F1 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ndc80Q9D0F1 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ndc80Q9D0F1 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ndc80Q9D0F1 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ndc80Q9D0F1 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.79■□□□□ 0.92
Ndc80Q9D0F1 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ndc80Q9D0F1 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ndc80Q9D0F1 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ndc80Q9D0F1 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ndc80Q9D0F1 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
Ndc80Q9D0F1 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Ndc80Q9D0F1 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.78■□□□□ 0.92
Ndc80Q9D0F1 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ndc80Q9D0F1 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.78■□□□□ 0.92
Ndc80Q9D0F1 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ndc80Q9D0F1 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ndc80Q9D0F1 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ndc80Q9D0F1 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ndc80Q9D0F1 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ndc80Q9D0F1 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ndc80Q9D0F1 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ndc80Q9D0F1 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ndc80Q9D0F1 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.77■□□□□ 0.92
Ndc80Q9D0F1 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ndc80Q9D0F1 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ndc80Q9D0F1 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.76■□□□□ 0.91
Ndc80Q9D0F1 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Ndc80Q9D0F1 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.76■□□□□ 0.91
Ndc80Q9D0F1 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.76■□□□□ 0.91
Ndc80Q9D0F1 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.76■□□□□ 0.91
Ndc80Q9D0F1 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.76■□□□□ 0.91
Ndc80Q9D0F1 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ndc80Q9D0F1 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.75■□□□□ 0.91
Ndc80Q9D0F1 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Ndc80Q9D0F1 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ndc80Q9D0F1 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ndc80Q9D0F1 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ndc80Q9D0F1 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ndc80Q9D0F1 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ndc80Q9D0F1 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ndc80Q9D0F1 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Ndc80Q9D0F1 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.74■□□□□ 0.91
Ndc80Q9D0F1 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Ndc80Q9D0F1 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ndc80Q9D0F1 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ndc80Q9D0F1 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ndc80Q9D0F1 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ndc80Q9D0F1 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Ndc80Q9D0F1 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ndc80Q9D0F1 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ndc80Q9D0F1 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ndc80Q9D0F1 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ndc80Q9D0F1 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ndc80Q9D0F1 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Ndc80Q9D0F1 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ndc80Q9D0F1 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.73■□□□□ 0.91
Ndc80Q9D0F1 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ndc80Q9D0F1 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ndc80Q9D0F1 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.72■□□□□ 0.91
Ndc80Q9D0F1 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Ndc80Q9D0F1 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Ndc80Q9D0F1 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ndc80Q9D0F1 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ndc80Q9D0F1 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ndc80Q9D0F1 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ndc80Q9D0F1 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Ndc80Q9D0F1 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ndc80Q9D0F1 Gm40881-201ENSMUST00000223397 166 ntBASIC20.71■□□□□ 0.91
Ndc80Q9D0F1 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ndc80Q9D0F1 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Ndc80Q9D0F1 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ndc80Q9D0F1 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Ndc80Q9D0F1 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms