Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ska1Q9CPV1 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.31■□□□□ 0.68
Ska1Q9CPV1 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Ska1Q9CPV1 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC19.3■□□□□ 0.68
Ska1Q9CPV1 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Ska1Q9CPV1 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ska1Q9CPV1 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Ska1Q9CPV1 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ska1Q9CPV1 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ska1Q9CPV1 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ska1Q9CPV1 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ska1Q9CPV1 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ska1Q9CPV1 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ska1Q9CPV1 Nsd1-206ENSMUST00000224918 1001 ntBASIC19.29■□□□□ 0.68
Ska1Q9CPV1 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Ska1Q9CPV1 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ska1Q9CPV1 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ska1Q9CPV1 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Ska1Q9CPV1 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Ska1Q9CPV1 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ska1Q9CPV1 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ska1Q9CPV1 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC19.28■□□□□ 0.68
Ska1Q9CPV1 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ska1Q9CPV1 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ska1Q9CPV1 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ska1Q9CPV1 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ska1Q9CPV1 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ska1Q9CPV1 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Ska1Q9CPV1 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ska1Q9CPV1 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ska1Q9CPV1 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Ska1Q9CPV1 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Ska1Q9CPV1 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ska1Q9CPV1 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ska1Q9CPV1 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ska1Q9CPV1 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ska1Q9CPV1 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
Ska1Q9CPV1 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Ska1Q9CPV1 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ska1Q9CPV1 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ska1Q9CPV1 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
Ska1Q9CPV1 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ska1Q9CPV1 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ska1Q9CPV1 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ska1Q9CPV1 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ska1Q9CPV1 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ska1Q9CPV1 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ska1Q9CPV1 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ska1Q9CPV1 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ska1Q9CPV1 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ska1Q9CPV1 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Ska1Q9CPV1 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ska1Q9CPV1 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ska1Q9CPV1 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ska1Q9CPV1 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC19.25■□□□□ 0.67
Ska1Q9CPV1 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Ska1Q9CPV1 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Ska1Q9CPV1 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ska1Q9CPV1 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ska1Q9CPV1 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ska1Q9CPV1 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ska1Q9CPV1 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ska1Q9CPV1 Gm5067-201ENSMUST00000170449 1009 ntBASIC19.24■□□□□ 0.67
Ska1Q9CPV1 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ska1Q9CPV1 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.24■□□□□ 0.67
Ska1Q9CPV1 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Ska1Q9CPV1 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.24■□□□□ 0.67
Ska1Q9CPV1 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Ska1Q9CPV1 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
Ska1Q9CPV1 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ska1Q9CPV1 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ska1Q9CPV1 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
Ska1Q9CPV1 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ska1Q9CPV1 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ska1Q9CPV1 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.23■□□□□ 0.67
Ska1Q9CPV1 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ska1Q9CPV1 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ska1Q9CPV1 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ska1Q9CPV1 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ska1Q9CPV1 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ska1Q9CPV1 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ska1Q9CPV1 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ska1Q9CPV1 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ska1Q9CPV1 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Ska1Q9CPV1 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ska1Q9CPV1 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ska1Q9CPV1 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.21■□□□□ 0.67
Ska1Q9CPV1 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ska1Q9CPV1 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Ska1Q9CPV1 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.21■□□□□ 0.67
Ska1Q9CPV1 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ska1Q9CPV1 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC19.21■□□□□ 0.67
Ska1Q9CPV1 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ska1Q9CPV1 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.21■□□□□ 0.67
Ska1Q9CPV1 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ska1Q9CPV1 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ska1Q9CPV1 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ska1Q9CPV1 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ska1Q9CPV1 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ska1Q9CPV1 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms