Protein–RNA interactions for Protein: Q91XX8

Pcdhgb1, Protocadherin gamma B1, mousemouse

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb1Q91XX8 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Pcdhgb1Q91XX8 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.35■■□□□ 1.01
Pcdhgb1Q91XX8 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC21.34■■□□□ 1.01
Pcdhgb1Q91XX8 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
Pcdhgb1Q91XX8 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC21.34■■□□□ 1.01
Pcdhgb1Q91XX8 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhgb1Q91XX8 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhgb1Q91XX8 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhgb1Q91XX8 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhgb1Q91XX8 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhgb1Q91XX8 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.34■■□□□ 1.01
Pcdhgb1Q91XX8 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdhgb1Q91XX8 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdhgb1Q91XX8 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Pcdhgb1Q91XX8 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Pcdhgb1Q91XX8 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC21.33■■□□□ 1
Pcdhgb1Q91XX8 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Pcdhgb1Q91XX8 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhgb1Q91XX8 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.32■■□□□ 1
Pcdhgb1Q91XX8 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhgb1Q91XX8 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhgb1Q91XX8 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhgb1Q91XX8 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC21.32■■□□□ 1
Pcdhgb1Q91XX8 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhgb1Q91XX8 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC21.32■■□□□ 1
Pcdhgb1Q91XX8 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhgb1Q91XX8 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhgb1Q91XX8 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhgb1Q91XX8 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhgb1Q91XX8 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC21.31■■□□□ 1
Pcdhgb1Q91XX8 Gm12821-201ENSMUST00000120022 600 ntBASIC21.31■■□□□ 1
Pcdhgb1Q91XX8 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC21.31■■□□□ 1
Pcdhgb1Q91XX8 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhgb1Q91XX8 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC21.31■■□□□ 1
Pcdhgb1Q91XX8 Gm9207-201ENSMUST00000198773 1115 ntBASIC21.31■■□□□ 1
Pcdhgb1Q91XX8 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC21.31■■□□□ 1
Pcdhgb1Q91XX8 Gm45417-201ENSMUST00000209533 758 ntBASIC21.31■■□□□ 1
Pcdhgb1Q91XX8 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhgb1Q91XX8 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhgb1Q91XX8 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdhgb1Q91XX8 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC21.3■■□□□ 1
Pcdhgb1Q91XX8 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdhgb1Q91XX8 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC21.3■■□□□ 1
Pcdhgb1Q91XX8 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdhgb1Q91XX8 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC21.3■■□□□ 1
Pcdhgb1Q91XX8 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC21.3■■□□□ 1
Pcdhgb1Q91XX8 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC21.3■■□□□ 1
Pcdhgb1Q91XX8 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC21.29■■□□□ 1
Pcdhgb1Q91XX8 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhgb1Q91XX8 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Pcdhgb1Q91XX8 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhgb1Q91XX8 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC21.29■■□□□ 1
Pcdhgb1Q91XX8 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC21.29■■□□□ 1
Pcdhgb1Q91XX8 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhgb1Q91XX8 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.29■■□□□ 1
Pcdhgb1Q91XX8 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC21.29■■□□□ 1
Pcdhgb1Q91XX8 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhgb1Q91XX8 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC21.29■■□□□ 1
Pcdhgb1Q91XX8 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhgb1Q91XX8 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhgb1Q91XX8 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhgb1Q91XX8 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhgb1Q91XX8 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhgb1Q91XX8 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhgb1Q91XX8 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC21.28■■□□□ 1
Pcdhgb1Q91XX8 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhgb1Q91XX8 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdhgb1Q91XX8 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC21.27■■□□□ 1
Pcdhgb1Q91XX8 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC21.27■■□□□ 1
Pcdhgb1Q91XX8 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC21.27■■□□□ 1
Pcdhgb1Q91XX8 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Pcdhgb1Q91XX8 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC21.27■■□□□ 1
Pcdhgb1Q91XX8 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdhgb1Q91XX8 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.27■□□□□ 0.99
Pcdhgb1Q91XX8 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Pcdhgb1Q91XX8 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.26■□□□□ 0.99
Pcdhgb1Q91XX8 AC164883.3-201ENSMUST00000227396 1774 ntBASIC21.26■□□□□ 0.99
Pcdhgb1Q91XX8 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhgb1Q91XX8 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhgb1Q91XX8 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
Pcdhgb1Q91XX8 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhgb1Q91XX8 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC21.26■□□□□ 0.99
Pcdhgb1Q91XX8 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC21.26■□□□□ 0.99
Pcdhgb1Q91XX8 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhgb1Q91XX8 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhgb1Q91XX8 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Pcdhgb1Q91XX8 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhgb1Q91XX8 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC21.25■□□□□ 0.99
Pcdhgb1Q91XX8 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Pcdhgb1Q91XX8 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhgb1Q91XX8 Gm7143-201ENSMUST00000222811 859 ntBASIC21.25■□□□□ 0.99
Pcdhgb1Q91XX8 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhgb1Q91XX8 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhgb1Q91XX8 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhgb1Q91XX8 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhgb1Q91XX8 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhgb1Q91XX8 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhgb1Q91XX8 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhgb1Q91XX8 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhgb1Q91XX8 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms