Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
Zcchc9Q8R1J3 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.45■□□□□ 0.86
Zcchc9Q8R1J3 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Zcchc9Q8R1J3 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Zcchc9Q8R1J3 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Zcchc9Q8R1J3 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Zcchc9Q8R1J3 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Zcchc9Q8R1J3 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Zcchc9Q8R1J3 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Zcchc9Q8R1J3 Gm9870-201ENSMUST00000063874 645 ntBASIC20.44■□□□□ 0.86
Zcchc9Q8R1J3 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20.44■□□□□ 0.86
Zcchc9Q8R1J3 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Zcchc9Q8R1J3 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Zcchc9Q8R1J3 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Zcchc9Q8R1J3 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Zcchc9Q8R1J3 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Zcchc9Q8R1J3 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Zcchc9Q8R1J3 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Zcchc9Q8R1J3 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Zcchc9Q8R1J3 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.42■□□□□ 0.86
Zcchc9Q8R1J3 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC20.42■□□□□ 0.86
Zcchc9Q8R1J3 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
Zcchc9Q8R1J3 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.42■□□□□ 0.86
Zcchc9Q8R1J3 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Zcchc9Q8R1J3 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Zcchc9Q8R1J3 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Zcchc9Q8R1J3 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Zcchc9Q8R1J3 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Zcchc9Q8R1J3 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Zcchc9Q8R1J3 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
Zcchc9Q8R1J3 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Zcchc9Q8R1J3 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Zcchc9Q8R1J3 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.4■□□□□ 0.86
Zcchc9Q8R1J3 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Zcchc9Q8R1J3 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC20.4■□□□□ 0.86
Zcchc9Q8R1J3 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.4■□□□□ 0.86
Zcchc9Q8R1J3 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Zcchc9Q8R1J3 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Zcchc9Q8R1J3 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Zcchc9Q8R1J3 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.39■□□□□ 0.86
Zcchc9Q8R1J3 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Zcchc9Q8R1J3 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.39■□□□□ 0.85
Zcchc9Q8R1J3 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Zcchc9Q8R1J3 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC20.39■□□□□ 0.85
Zcchc9Q8R1J3 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.39■□□□□ 0.85
Zcchc9Q8R1J3 Flvcr1-202ENSMUST00000191946 1216 ntBASIC20.39■□□□□ 0.85
Zcchc9Q8R1J3 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Zcchc9Q8R1J3 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Zcchc9Q8R1J3 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.39■□□□□ 0.85
Zcchc9Q8R1J3 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Zcchc9Q8R1J3 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Zcchc9Q8R1J3 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
Zcchc9Q8R1J3 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Zcchc9Q8R1J3 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Zcchc9Q8R1J3 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Zcchc9Q8R1J3 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.38■□□□□ 0.85
Zcchc9Q8R1J3 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Zcchc9Q8R1J3 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Zcchc9Q8R1J3 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Zcchc9Q8R1J3 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Zcchc9Q8R1J3 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Zcchc9Q8R1J3 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.37■□□□□ 0.85
Zcchc9Q8R1J3 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Zcchc9Q8R1J3 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Zcchc9Q8R1J3 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC20.37■□□□□ 0.85
Zcchc9Q8R1J3 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Zcchc9Q8R1J3 Gm43137-201ENSMUST00000198052 594 ntBASIC20.37■□□□□ 0.85
Zcchc9Q8R1J3 Gm5297-201ENSMUST00000198555 1171 ntBASIC20.37■□□□□ 0.85
Zcchc9Q8R1J3 Slc35b2-207ENSMUST00000226086 850 ntBASIC20.37■□□□□ 0.85
Zcchc9Q8R1J3 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Zcchc9Q8R1J3 Gm6139-201ENSMUST00000079261 882 ntBASIC20.37■□□□□ 0.85
Zcchc9Q8R1J3 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Zcchc9Q8R1J3 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Zcchc9Q8R1J3 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.36■□□□□ 0.85
Zcchc9Q8R1J3 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Zcchc9Q8R1J3 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Zcchc9Q8R1J3 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC20.36■□□□□ 0.85
Zcchc9Q8R1J3 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Zcchc9Q8R1J3 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Zcchc9Q8R1J3 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Zcchc9Q8R1J3 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Zcchc9Q8R1J3 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Zcchc9Q8R1J3 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Zcchc9Q8R1J3 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Zcchc9Q8R1J3 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Zcchc9Q8R1J3 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.35■□□□□ 0.85
Zcchc9Q8R1J3 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Zcchc9Q8R1J3 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
Zcchc9Q8R1J3 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Zcchc9Q8R1J3 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Zcchc9Q8R1J3 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.35■□□□□ 0.85
Zcchc9Q8R1J3 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Zcchc9Q8R1J3 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Zcchc9Q8R1J3 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC20.35■□□□□ 0.85
Zcchc9Q8R1J3 Gm2011-201ENSMUST00000203124 1263 ntBASIC20.35■□□□□ 0.85
Zcchc9Q8R1J3 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Zcchc9Q8R1J3 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Zcchc9Q8R1J3 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Zcchc9Q8R1J3 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC20.34■□□□□ 0.85
Zcchc9Q8R1J3 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 102 ms