Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
Rpp40Q8R1F9 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC22.12■■□□□ 1.13
Rpp40Q8R1F9 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Rpp40Q8R1F9 Gm13241-201ENSMUST00000094493 780 ntBASIC22.12■■□□□ 1.13
Rpp40Q8R1F9 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Rpp40Q8R1F9 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Rpp40Q8R1F9 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Rpp40Q8R1F9 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
Rpp40Q8R1F9 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
Rpp40Q8R1F9 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Rpp40Q8R1F9 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Rpp40Q8R1F9 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
Rpp40Q8R1F9 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Rpp40Q8R1F9 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Rpp40Q8R1F9 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC22.11■■□□□ 1.13
Rpp40Q8R1F9 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Rpp40Q8R1F9 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC22.1■■□□□ 1.13
Rpp40Q8R1F9 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC22.1■■□□□ 1.13
Rpp40Q8R1F9 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
Rpp40Q8R1F9 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Rpp40Q8R1F9 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Rpp40Q8R1F9 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
Rpp40Q8R1F9 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Rpp40Q8R1F9 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Rpp40Q8R1F9 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Rpp40Q8R1F9 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC22.1■■□□□ 1.13
Rpp40Q8R1F9 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC22.09■■□□□ 1.13
Rpp40Q8R1F9 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Rpp40Q8R1F9 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Rpp40Q8R1F9 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Rpp40Q8R1F9 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC22.09■■□□□ 1.13
Rpp40Q8R1F9 Gm10657-201ENSMUST00000193528 1031 ntBASIC22.09■■□□□ 1.13
Rpp40Q8R1F9 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Rpp40Q8R1F9 Gm12504-201ENSMUST00000120860 2231 ntBASIC22.08■■□□□ 1.13
Rpp40Q8R1F9 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Rpp40Q8R1F9 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Rpp40Q8R1F9 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Rpp40Q8R1F9 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Rpp40Q8R1F9 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
Rpp40Q8R1F9 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
Rpp40Q8R1F9 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Rpp40Q8R1F9 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC22.07■■□□□ 1.12
Rpp40Q8R1F9 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Rpp40Q8R1F9 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Rpp40Q8R1F9 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Rpp40Q8R1F9 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Rpp40Q8R1F9 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC22.07■■□□□ 1.12
Rpp40Q8R1F9 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Rpp40Q8R1F9 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Rpp40Q8R1F9 Gm43034-201ENSMUST00000198678 1364 ntBASIC22.07■■□□□ 1.12
Rpp40Q8R1F9 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Rpp40Q8R1F9 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Rpp40Q8R1F9 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC22.06■■□□□ 1.12
Rpp40Q8R1F9 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC22.06■■□□□ 1.12
Rpp40Q8R1F9 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Rpp40Q8R1F9 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Rpp40Q8R1F9 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Rpp40Q8R1F9 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Rpp40Q8R1F9 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
Rpp40Q8R1F9 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Rpp40Q8R1F9 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Rpp40Q8R1F9 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
Rpp40Q8R1F9 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Rpp40Q8R1F9 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Rpp40Q8R1F9 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Rpp40Q8R1F9 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Rpp40Q8R1F9 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
Rpp40Q8R1F9 Krt8-ps-201ENSMUST00000208495 945 ntBASIC22.04■■□□□ 1.12
Rpp40Q8R1F9 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Rpp40Q8R1F9 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Rpp40Q8R1F9 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Rpp40Q8R1F9 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Rpp40Q8R1F9 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Rpp40Q8R1F9 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Rpp40Q8R1F9 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Rpp40Q8R1F9 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Rpp40Q8R1F9 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC22.03■■□□□ 1.12
Rpp40Q8R1F9 AC140930.3-201ENSMUST00000222935 274 ntBASIC22.03■■□□□ 1.12
Rpp40Q8R1F9 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Rpp40Q8R1F9 Gm13042-201ENSMUST00000119244 1955 ntBASIC22.02■■□□□ 1.12
Rpp40Q8R1F9 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
Rpp40Q8R1F9 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC22.02■■□□□ 1.12
Rpp40Q8R1F9 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Rpp40Q8R1F9 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Rpp40Q8R1F9 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC22.01■■□□□ 1.11
Rpp40Q8R1F9 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Rpp40Q8R1F9 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Rpp40Q8R1F9 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC22.01■■□□□ 1.11
Rpp40Q8R1F9 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Rpp40Q8R1F9 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Rpp40Q8R1F9 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Rpp40Q8R1F9 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Rpp40Q8R1F9 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Rpp40Q8R1F9 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
Rpp40Q8R1F9 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC22■■□□□ 1.11
Rpp40Q8R1F9 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Rpp40Q8R1F9 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC22■■□□□ 1.11
Rpp40Q8R1F9 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Rpp40Q8R1F9 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
Rpp40Q8R1F9 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms