Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Smc4Q8CG47 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Smc4Q8CG47 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC25.4■■□□□ 1.66
Smc4Q8CG47 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Smc4Q8CG47 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Smc4Q8CG47 Gm5913-201ENSMUST00000119397 1399 ntBASIC25.4■■□□□ 1.66
Smc4Q8CG47 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC25.4■■□□□ 1.66
Smc4Q8CG47 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Smc4Q8CG47 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.66
Smc4Q8CG47 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC25.39■■□□□ 1.66
Smc4Q8CG47 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC25.39■■□□□ 1.66
Smc4Q8CG47 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Smc4Q8CG47 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Smc4Q8CG47 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Smc4Q8CG47 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC25.38■■□□□ 1.65
Smc4Q8CG47 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC25.38■■□□□ 1.65
Smc4Q8CG47 Gm43759-201ENSMUST00000196925 1261 ntBASIC25.38■■□□□ 1.65
Smc4Q8CG47 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Smc4Q8CG47 Gm44949-201ENSMUST00000206423 1450 ntBASIC25.38■■□□□ 1.65
Smc4Q8CG47 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
Smc4Q8CG47 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Smc4Q8CG47 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC25.37■■□□□ 1.65
Smc4Q8CG47 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Smc4Q8CG47 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Smc4Q8CG47 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC25.37■■□□□ 1.65
Smc4Q8CG47 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Smc4Q8CG47 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Smc4Q8CG47 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC25.37■■□□□ 1.65
Smc4Q8CG47 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Smc4Q8CG47 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC25.37■■□□□ 1.65
Smc4Q8CG47 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC25.37■■□□□ 1.65
Smc4Q8CG47 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.65
Smc4Q8CG47 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Smc4Q8CG47 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC25.37■■□□□ 1.65
Smc4Q8CG47 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Smc4Q8CG47 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC25.36■■□□□ 1.65
Smc4Q8CG47 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Smc4Q8CG47 Gm8770-201ENSMUST00000121113 1109 ntBASIC25.36■■□□□ 1.65
Smc4Q8CG47 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
Smc4Q8CG47 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC25.36■■□□□ 1.65
Smc4Q8CG47 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Smc4Q8CG47 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
Smc4Q8CG47 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Smc4Q8CG47 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
Smc4Q8CG47 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC25.35■■□□□ 1.65
Smc4Q8CG47 Gm45417-201ENSMUST00000209533 758 ntBASIC25.35■■□□□ 1.65
Smc4Q8CG47 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Smc4Q8CG47 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Smc4Q8CG47 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Smc4Q8CG47 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC25.34■■□□□ 1.65
Smc4Q8CG47 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Smc4Q8CG47 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC25.34■■□□□ 1.65
Smc4Q8CG47 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Smc4Q8CG47 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Smc4Q8CG47 Gm26766-202ENSMUST00000227544 2347 ntBASIC25.34■■□□□ 1.65
Smc4Q8CG47 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Smc4Q8CG47 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Smc4Q8CG47 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC25.34■■□□□ 1.65
Smc4Q8CG47 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Smc4Q8CG47 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC25.34■■□□□ 1.65
Smc4Q8CG47 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Smc4Q8CG47 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC25.33■■□□□ 1.65
Smc4Q8CG47 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
Smc4Q8CG47 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC25.32■■□□□ 1.64
Smc4Q8CG47 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Smc4Q8CG47 Gm43530-201ENSMUST00000195920 274 ntBASIC25.32■■□□□ 1.64
Smc4Q8CG47 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC25.32■■□□□ 1.64
Smc4Q8CG47 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Smc4Q8CG47 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Smc4Q8CG47 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC25.31■■□□□ 1.64
Smc4Q8CG47 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Smc4Q8CG47 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Smc4Q8CG47 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Smc4Q8CG47 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
Smc4Q8CG47 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC25.31■■□□□ 1.64
Smc4Q8CG47 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Smc4Q8CG47 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Smc4Q8CG47 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC25.29■■□□□ 1.64
Smc4Q8CG47 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Smc4Q8CG47 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Smc4Q8CG47 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC25.29■■□□□ 1.64
Smc4Q8CG47 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Smc4Q8CG47 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Smc4Q8CG47 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Smc4Q8CG47 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC25.29■■□□□ 1.64
Smc4Q8CG47 AC166356.1-201ENSMUST00000228236 1426 ntBASIC25.29■■□□□ 1.64
Smc4Q8CG47 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Smc4Q8CG47 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Smc4Q8CG47 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Smc4Q8CG47 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC25.28■■□□□ 1.64
Smc4Q8CG47 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC25.28■■□□□ 1.64
Smc4Q8CG47 Gm43137-201ENSMUST00000198052 594 ntBASIC25.27■■□□□ 1.64
Smc4Q8CG47 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Smc4Q8CG47 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Smc4Q8CG47 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC25.27■■□□□ 1.64
Smc4Q8CG47 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC25.27■■□□□ 1.64
Smc4Q8CG47 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC25.27■■□□□ 1.64
Smc4Q8CG47 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Smc4Q8CG47 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
Smc4Q8CG47 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms