Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lrif1Q8CDD9 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lrif1Q8CDD9 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lrif1Q8CDD9 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lrif1Q8CDD9 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
Lrif1Q8CDD9 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Lrif1Q8CDD9 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Lrif1Q8CDD9 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lrif1Q8CDD9 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lrif1Q8CDD9 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lrif1Q8CDD9 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lrif1Q8CDD9 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Lrif1Q8CDD9 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Lrif1Q8CDD9 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Lrif1Q8CDD9 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lrif1Q8CDD9 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lrif1Q8CDD9 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Lrif1Q8CDD9 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.25■□□□□ 0.83
Lrif1Q8CDD9 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Lrif1Q8CDD9 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Lrif1Q8CDD9 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Lrif1Q8CDD9 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lrif1Q8CDD9 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lrif1Q8CDD9 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Lrif1Q8CDD9 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Lrif1Q8CDD9 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lrif1Q8CDD9 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lrif1Q8CDD9 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lrif1Q8CDD9 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lrif1Q8CDD9 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lrif1Q8CDD9 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lrif1Q8CDD9 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Lrif1Q8CDD9 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.24■□□□□ 0.83
Lrif1Q8CDD9 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lrif1Q8CDD9 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.24■□□□□ 0.83
Lrif1Q8CDD9 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Lrif1Q8CDD9 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Lrif1Q8CDD9 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lrif1Q8CDD9 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lrif1Q8CDD9 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Lrif1Q8CDD9 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lrif1Q8CDD9 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lrif1Q8CDD9 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Lrif1Q8CDD9 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Lrif1Q8CDD9 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lrif1Q8CDD9 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.22■□□□□ 0.83
Lrif1Q8CDD9 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Lrif1Q8CDD9 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Lrif1Q8CDD9 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lrif1Q8CDD9 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lrif1Q8CDD9 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lrif1Q8CDD9 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.21■□□□□ 0.83
Lrif1Q8CDD9 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lrif1Q8CDD9 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lrif1Q8CDD9 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lrif1Q8CDD9 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Lrif1Q8CDD9 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
Lrif1Q8CDD9 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lrif1Q8CDD9 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lrif1Q8CDD9 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lrif1Q8CDD9 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Lrif1Q8CDD9 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lrif1Q8CDD9 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Lrif1Q8CDD9 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
Lrif1Q8CDD9 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Lrif1Q8CDD9 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lrif1Q8CDD9 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.2■□□□□ 0.82
Lrif1Q8CDD9 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Lrif1Q8CDD9 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lrif1Q8CDD9 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lrif1Q8CDD9 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lrif1Q8CDD9 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Lrif1Q8CDD9 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Lrif1Q8CDD9 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.19■□□□□ 0.82
Lrif1Q8CDD9 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lrif1Q8CDD9 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lrif1Q8CDD9 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lrif1Q8CDD9 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lrif1Q8CDD9 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.19■□□□□ 0.82
Lrif1Q8CDD9 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lrif1Q8CDD9 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lrif1Q8CDD9 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lrif1Q8CDD9 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lrif1Q8CDD9 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lrif1Q8CDD9 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Lrif1Q8CDD9 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lrif1Q8CDD9 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.18■□□□□ 0.82
Lrif1Q8CDD9 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lrif1Q8CDD9 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lrif1Q8CDD9 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.18■□□□□ 0.82
Lrif1Q8CDD9 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lrif1Q8CDD9 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lrif1Q8CDD9 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lrif1Q8CDD9 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lrif1Q8CDD9 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lrif1Q8CDD9 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lrif1Q8CDD9 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lrif1Q8CDD9 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lrif1Q8CDD9 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Lrif1Q8CDD9 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms