Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Lysmd4Q8CC84 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Lysmd4Q8CC84 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC18.47■□□□□ 0.55
Lysmd4Q8CC84 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Lysmd4Q8CC84 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Lysmd4Q8CC84 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Lysmd4Q8CC84 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Lysmd4Q8CC84 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Lysmd4Q8CC84 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Lysmd4Q8CC84 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Lysmd4Q8CC84 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Lysmd4Q8CC84 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Lysmd4Q8CC84 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Lysmd4Q8CC84 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Lysmd4Q8CC84 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Lysmd4Q8CC84 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Lysmd4Q8CC84 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Lysmd4Q8CC84 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Lysmd4Q8CC84 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Lysmd4Q8CC84 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Lysmd4Q8CC84 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Lysmd4Q8CC84 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Lysmd4Q8CC84 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Lysmd4Q8CC84 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.44■□□□□ 0.54
Lysmd4Q8CC84 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Lysmd4Q8CC84 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Lysmd4Q8CC84 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC18.43■□□□□ 0.54
Lysmd4Q8CC84 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Lysmd4Q8CC84 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.43■□□□□ 0.54
Lysmd4Q8CC84 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Lysmd4Q8CC84 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Lysmd4Q8CC84 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Lysmd4Q8CC84 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.43■□□□□ 0.54
Lysmd4Q8CC84 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Lysmd4Q8CC84 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Lysmd4Q8CC84 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Lysmd4Q8CC84 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC18.42■□□□□ 0.54
Lysmd4Q8CC84 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lysmd4Q8CC84 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lysmd4Q8CC84 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lysmd4Q8CC84 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Lysmd4Q8CC84 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lysmd4Q8CC84 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lysmd4Q8CC84 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lysmd4Q8CC84 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lysmd4Q8CC84 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.42■□□□□ 0.54
Lysmd4Q8CC84 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lysmd4Q8CC84 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC18.41■□□□□ 0.54
Lysmd4Q8CC84 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lysmd4Q8CC84 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lysmd4Q8CC84 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lysmd4Q8CC84 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lysmd4Q8CC84 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lysmd4Q8CC84 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lysmd4Q8CC84 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lysmd4Q8CC84 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lysmd4Q8CC84 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Lysmd4Q8CC84 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lysmd4Q8CC84 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.41■□□□□ 0.54
Lysmd4Q8CC84 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.41■□□□□ 0.54
Lysmd4Q8CC84 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lysmd4Q8CC84 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lysmd4Q8CC84 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lysmd4Q8CC84 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lysmd4Q8CC84 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lysmd4Q8CC84 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Lysmd4Q8CC84 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC18.4■□□□□ 0.54
Lysmd4Q8CC84 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Lysmd4Q8CC84 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lysmd4Q8CC84 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.4■□□□□ 0.54
Lysmd4Q8CC84 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
Lysmd4Q8CC84 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Lysmd4Q8CC84 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Lysmd4Q8CC84 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Lysmd4Q8CC84 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.39■□□□□ 0.53
Lysmd4Q8CC84 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lysmd4Q8CC84 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lysmd4Q8CC84 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lysmd4Q8CC84 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lysmd4Q8CC84 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.38■□□□□ 0.53
Lysmd4Q8CC84 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lysmd4Q8CC84 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Lysmd4Q8CC84 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC18.38■□□□□ 0.53
Lysmd4Q8CC84 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lysmd4Q8CC84 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lysmd4Q8CC84 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lysmd4Q8CC84 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Lysmd4Q8CC84 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lysmd4Q8CC84 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lysmd4Q8CC84 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Lysmd4Q8CC84 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lysmd4Q8CC84 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Lysmd4Q8CC84 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lysmd4Q8CC84 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Lysmd4Q8CC84 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lysmd4Q8CC84 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lysmd4Q8CC84 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Lysmd4Q8CC84 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lysmd4Q8CC84 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lysmd4Q8CC84 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms