Protein–RNA interactions for Protein: Q8C7D3

Pabpc5, Poly A binding protein, cytoplasmic 5, mousemouse

Known RBP Predictions only

Length 381 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpc5Q8C7D3 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pabpc5Q8C7D3 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pabpc5Q8C7D3 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pabpc5Q8C7D3 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Pabpc5Q8C7D3 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pabpc5Q8C7D3 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Pabpc5Q8C7D3 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Pabpc5Q8C7D3 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pabpc5Q8C7D3 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pabpc5Q8C7D3 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pabpc5Q8C7D3 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Pabpc5Q8C7D3 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Pabpc5Q8C7D3 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pabpc5Q8C7D3 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.52■□□□□ 0.88
Pabpc5Q8C7D3 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.88
Pabpc5Q8C7D3 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Pabpc5Q8C7D3 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pabpc5Q8C7D3 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC20.52■□□□□ 0.88
Pabpc5Q8C7D3 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Pabpc5Q8C7D3 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Pabpc5Q8C7D3 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.51■□□□□ 0.87
Pabpc5Q8C7D3 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pabpc5Q8C7D3 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pabpc5Q8C7D3 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Pabpc5Q8C7D3 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pabpc5Q8C7D3 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pabpc5Q8C7D3 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pabpc5Q8C7D3 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Pabpc5Q8C7D3 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Pabpc5Q8C7D3 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pabpc5Q8C7D3 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pabpc5Q8C7D3 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pabpc5Q8C7D3 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pabpc5Q8C7D3 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pabpc5Q8C7D3 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pabpc5Q8C7D3 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pabpc5Q8C7D3 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Pabpc5Q8C7D3 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pabpc5Q8C7D3 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pabpc5Q8C7D3 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Pabpc5Q8C7D3 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Pabpc5Q8C7D3 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.5■□□□□ 0.87
Pabpc5Q8C7D3 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Pabpc5Q8C7D3 Gm12821-201ENSMUST00000120022 600 ntBASIC20.49■□□□□ 0.87
Pabpc5Q8C7D3 Gm12922-201ENSMUST00000120626 809 ntBASIC20.49■□□□□ 0.87
Pabpc5Q8C7D3 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pabpc5Q8C7D3 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pabpc5Q8C7D3 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pabpc5Q8C7D3 Notumos-201ENSMUST00000151998 2659 ntBASIC20.49■□□□□ 0.87
Pabpc5Q8C7D3 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pabpc5Q8C7D3 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pabpc5Q8C7D3 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pabpc5Q8C7D3 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Pabpc5Q8C7D3 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Pabpc5Q8C7D3 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Pabpc5Q8C7D3 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pabpc5Q8C7D3 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Pabpc5Q8C7D3 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.48■□□□□ 0.87
Pabpc5Q8C7D3 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Pabpc5Q8C7D3 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pabpc5Q8C7D3 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pabpc5Q8C7D3 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pabpc5Q8C7D3 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.47■□□□□ 0.87
Pabpc5Q8C7D3 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC20.47■□□□□ 0.87
Pabpc5Q8C7D3 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Pabpc5Q8C7D3 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Pabpc5Q8C7D3 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Pabpc5Q8C7D3 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.47■□□□□ 0.87
Pabpc5Q8C7D3 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pabpc5Q8C7D3 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pabpc5Q8C7D3 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pabpc5Q8C7D3 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pabpc5Q8C7D3 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.46■□□□□ 0.87
Pabpc5Q8C7D3 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Pabpc5Q8C7D3 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pabpc5Q8C7D3 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pabpc5Q8C7D3 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.46■□□□□ 0.87
Pabpc5Q8C7D3 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pabpc5Q8C7D3 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Pabpc5Q8C7D3 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Pabpc5Q8C7D3 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pabpc5Q8C7D3 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pabpc5Q8C7D3 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.45■□□□□ 0.86
Pabpc5Q8C7D3 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pabpc5Q8C7D3 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.45■□□□□ 0.86
Pabpc5Q8C7D3 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pabpc5Q8C7D3 AC140930.3-201ENSMUST00000222935 274 ntBASIC20.45■□□□□ 0.86
Pabpc5Q8C7D3 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Pabpc5Q8C7D3 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
Pabpc5Q8C7D3 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pabpc5Q8C7D3 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pabpc5Q8C7D3 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pabpc5Q8C7D3 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.44■□□□□ 0.86
Pabpc5Q8C7D3 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pabpc5Q8C7D3 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Pabpc5Q8C7D3 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Pabpc5Q8C7D3 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Pabpc5Q8C7D3 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pabpc5Q8C7D3 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.43■□□□□ 0.86
Pabpc5Q8C7D3 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC20.43■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 97.7 ms