Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smim4Q8C1Q6 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smim4Q8C1Q6 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smim4Q8C1Q6 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Smim4Q8C1Q6 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smim4Q8C1Q6 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smim4Q8C1Q6 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smim4Q8C1Q6 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Smim4Q8C1Q6 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smim4Q8C1Q6 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smim4Q8C1Q6 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Smim4Q8C1Q6 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC17.15■□□□□ 0.34
Smim4Q8C1Q6 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smim4Q8C1Q6 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Smim4Q8C1Q6 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smim4Q8C1Q6 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smim4Q8C1Q6 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smim4Q8C1Q6 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smim4Q8C1Q6 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smim4Q8C1Q6 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Smim4Q8C1Q6 Hsf1-207ENSMUST00000228371 2102 ntBASIC17.14■□□□□ 0.33
Smim4Q8C1Q6 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smim4Q8C1Q6 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Smim4Q8C1Q6 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC17.14■□□□□ 0.33
Smim4Q8C1Q6 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC17.14■□□□□ 0.33
Smim4Q8C1Q6 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Smim4Q8C1Q6 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smim4Q8C1Q6 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smim4Q8C1Q6 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smim4Q8C1Q6 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smim4Q8C1Q6 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Smim4Q8C1Q6 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smim4Q8C1Q6 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smim4Q8C1Q6 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smim4Q8C1Q6 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smim4Q8C1Q6 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smim4Q8C1Q6 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Smim4Q8C1Q6 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC17.13■□□□□ 0.33
Smim4Q8C1Q6 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smim4Q8C1Q6 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smim4Q8C1Q6 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Smim4Q8C1Q6 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Smim4Q8C1Q6 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smim4Q8C1Q6 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Smim4Q8C1Q6 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Smim4Q8C1Q6 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.12■□□□□ 0.33
Smim4Q8C1Q6 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smim4Q8C1Q6 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Smim4Q8C1Q6 Nsd1-203ENSMUST00000224156 1149 ntBASIC17.12■□□□□ 0.33
Smim4Q8C1Q6 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smim4Q8C1Q6 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Smim4Q8C1Q6 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smim4Q8C1Q6 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smim4Q8C1Q6 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smim4Q8C1Q6 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smim4Q8C1Q6 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC17.11■□□□□ 0.33
Smim4Q8C1Q6 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smim4Q8C1Q6 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smim4Q8C1Q6 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smim4Q8C1Q6 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smim4Q8C1Q6 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smim4Q8C1Q6 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smim4Q8C1Q6 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Smim4Q8C1Q6 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smim4Q8C1Q6 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smim4Q8C1Q6 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC17.1■□□□□ 0.33
Smim4Q8C1Q6 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Smim4Q8C1Q6 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Smim4Q8C1Q6 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Smim4Q8C1Q6 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smim4Q8C1Q6 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smim4Q8C1Q6 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Smim4Q8C1Q6 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Smim4Q8C1Q6 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smim4Q8C1Q6 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Smim4Q8C1Q6 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smim4Q8C1Q6 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smim4Q8C1Q6 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Smim4Q8C1Q6 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Smim4Q8C1Q6 Gm45444-201ENSMUST00000211394 898 ntBASIC17.09■□□□□ 0.33
Smim4Q8C1Q6 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smim4Q8C1Q6 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC17.09■□□□□ 0.33
Smim4Q8C1Q6 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smim4Q8C1Q6 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Smim4Q8C1Q6 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Smim4Q8C1Q6 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smim4Q8C1Q6 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smim4Q8C1Q6 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smim4Q8C1Q6 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Smim4Q8C1Q6 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Smim4Q8C1Q6 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Smim4Q8C1Q6 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smim4Q8C1Q6 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC17.08■□□□□ 0.32
Smim4Q8C1Q6 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC17.08■□□□□ 0.32
Smim4Q8C1Q6 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smim4Q8C1Q6 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Smim4Q8C1Q6 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
Smim4Q8C1Q6 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC17.08■□□□□ 0.32
Smim4Q8C1Q6 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smim4Q8C1Q6 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms