Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC21.39■■□□□ 1.01
Prpf38bQ80SY5 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Prpf38bQ80SY5 Gm27011-201ENSMUST00000182352 972 ntBASIC21.39■■□□□ 1.01
Prpf38bQ80SY5 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Prpf38bQ80SY5 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
Prpf38bQ80SY5 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Prpf38bQ80SY5 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC21.38■■□□□ 1.01
Prpf38bQ80SY5 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC21.38■■□□□ 1.01
Prpf38bQ80SY5 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Prpf38bQ80SY5 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC21.38■■□□□ 1.01
Prpf38bQ80SY5 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Prpf38bQ80SY5 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Prpf38bQ80SY5 Hsf1-207ENSMUST00000228371 2102 ntBASIC21.38■■□□□ 1.01
Prpf38bQ80SY5 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Prpf38bQ80SY5 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Prpf38bQ80SY5 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Prpf38bQ80SY5 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC21.37■■□□□ 1.01
Prpf38bQ80SY5 Gm27405-201ENSMUST00000184201 112 ntBASIC21.37■■□□□ 1.01
Prpf38bQ80SY5 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Prpf38bQ80SY5 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Prpf38bQ80SY5 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Prpf38bQ80SY5 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Prpf38bQ80SY5 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Prpf38bQ80SY5 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Prpf38bQ80SY5 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Prpf38bQ80SY5 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Prpf38bQ80SY5 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
Prpf38bQ80SY5 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC21.36■■□□□ 1.01
Prpf38bQ80SY5 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Prpf38bQ80SY5 Gm43017-201ENSMUST00000198296 752 ntBASIC21.36■■□□□ 1.01
Prpf38bQ80SY5 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC21.36■■□□□ 1.01
Prpf38bQ80SY5 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Prpf38bQ80SY5 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Prpf38bQ80SY5 Gm43006-201ENSMUST00000197702 1602 ntBASIC21.36■■□□□ 1.01
Prpf38bQ80SY5 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Prpf38bQ80SY5 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Prpf38bQ80SY5 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Prpf38bQ80SY5 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Prpf38bQ80SY5 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Prpf38bQ80SY5 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC21.35■■□□□ 1.01
Prpf38bQ80SY5 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Prpf38bQ80SY5 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC21.34■■□□□ 1.01
Prpf38bQ80SY5 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Prpf38bQ80SY5 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Prpf38bQ80SY5 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Prpf38bQ80SY5 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC21.34■■□□□ 1.01
Prpf38bQ80SY5 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Prpf38bQ80SY5 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Prpf38bQ80SY5 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Prpf38bQ80SY5 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Prpf38bQ80SY5 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Prpf38bQ80SY5 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Prpf38bQ80SY5 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
Prpf38bQ80SY5 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Prpf38bQ80SY5 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Prpf38bQ80SY5 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.33■■□□□ 1
Prpf38bQ80SY5 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Prpf38bQ80SY5 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Prpf38bQ80SY5 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Prpf38bQ80SY5 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.32■■□□□ 1
Prpf38bQ80SY5 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC21.32■■□□□ 1
Prpf38bQ80SY5 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Prpf38bQ80SY5 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Prpf38bQ80SY5 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Prpf38bQ80SY5 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Prpf38bQ80SY5 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Prpf38bQ80SY5 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC21.32■■□□□ 1
Prpf38bQ80SY5 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Prpf38bQ80SY5 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Prpf38bQ80SY5 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Prpf38bQ80SY5 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC21.31■■□□□ 1
Prpf38bQ80SY5 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Prpf38bQ80SY5 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC21.31■■□□□ 1
Prpf38bQ80SY5 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Prpf38bQ80SY5 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Prpf38bQ80SY5 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC21.3■■□□□ 1
Prpf38bQ80SY5 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Prpf38bQ80SY5 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC21.3■■□□□ 1
Prpf38bQ80SY5 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC21.29■■□□□ 1
Prpf38bQ80SY5 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Prpf38bQ80SY5 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC21.29■■□□□ 1
Prpf38bQ80SY5 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC21.29■■□□□ 1
Prpf38bQ80SY5 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Prpf38bQ80SY5 Mir7075-201ENSMUST00000184187 82 ntBASIC21.29■■□□□ 1
Prpf38bQ80SY5 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC21.29■■□□□ 1
Prpf38bQ80SY5 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Prpf38bQ80SY5 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC21.29■■□□□ 1
Prpf38bQ80SY5 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Prpf38bQ80SY5 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Prpf38bQ80SY5 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC21.29■■□□□ 1
Prpf38bQ80SY5 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Prpf38bQ80SY5 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Prpf38bQ80SY5 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Prpf38bQ80SY5 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Prpf38bQ80SY5 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC21.28■■□□□ 1
Prpf38bQ80SY5 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC21.28■■□□□ 1
Prpf38bQ80SY5 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Prpf38bQ80SY5 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Prpf38bQ80SY5 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Prpf38bQ80SY5 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 99.9 ms