Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC18.94■□□□□ 0.62
Pif1Q80SX8 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pif1Q80SX8 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Pif1Q80SX8 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
Pif1Q80SX8 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Pif1Q80SX8 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pif1Q80SX8 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pif1Q80SX8 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pif1Q80SX8 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pif1Q80SX8 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Pif1Q80SX8 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Pif1Q80SX8 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pif1Q80SX8 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC18.92■□□□□ 0.62
Pif1Q80SX8 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pif1Q80SX8 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC18.92■□□□□ 0.62
Pif1Q80SX8 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pif1Q80SX8 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pif1Q80SX8 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Pif1Q80SX8 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
Pif1Q80SX8 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pif1Q80SX8 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
Pif1Q80SX8 Gm10657-201ENSMUST00000193528 1031 ntBASIC18.92■□□□□ 0.62
Pif1Q80SX8 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pif1Q80SX8 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pif1Q80SX8 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Pif1Q80SX8 Kdm3b-204ENSMUST00000224715 2032 ntBASIC18.91■□□□□ 0.62
Pif1Q80SX8 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Pif1Q80SX8 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Pif1Q80SX8 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Pif1Q80SX8 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
Pif1Q80SX8 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC18.91■□□□□ 0.62
Pif1Q80SX8 Gm43017-201ENSMUST00000198296 752 ntBASIC18.91■□□□□ 0.62
Pif1Q80SX8 Gm21168-201ENSMUST00000199646 1096 ntBASIC18.91■□□□□ 0.62
Pif1Q80SX8 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pif1Q80SX8 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC18.91■□□□□ 0.62
Pif1Q80SX8 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Pif1Q80SX8 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Pif1Q80SX8 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pif1Q80SX8 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pif1Q80SX8 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC18.9■□□□□ 0.62
Pif1Q80SX8 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Pif1Q80SX8 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pif1Q80SX8 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.9■□□□□ 0.62
Pif1Q80SX8 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.9■□□□□ 0.62
Pif1Q80SX8 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Pif1Q80SX8 Gm5297-201ENSMUST00000198555 1171 ntBASIC18.9■□□□□ 0.62
Pif1Q80SX8 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pif1Q80SX8 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Pif1Q80SX8 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Pif1Q80SX8 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pif1Q80SX8 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC18.89■□□□□ 0.61
Pif1Q80SX8 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pif1Q80SX8 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pif1Q80SX8 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pif1Q80SX8 Gm8493-201ENSMUST00000196881 489 ntBASIC18.89■□□□□ 0.61
Pif1Q80SX8 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC18.89■□□□□ 0.61
Pif1Q80SX8 Gm7143-201ENSMUST00000222811 859 ntBASIC18.89■□□□□ 0.61
Pif1Q80SX8 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Pif1Q80SX8 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC18.88■□□□□ 0.61
Pif1Q80SX8 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Pif1Q80SX8 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC18.88■□□□□ 0.61
Pif1Q80SX8 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pif1Q80SX8 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Pif1Q80SX8 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pif1Q80SX8 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
Pif1Q80SX8 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pif1Q80SX8 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Pif1Q80SX8 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pif1Q80SX8 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pif1Q80SX8 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pif1Q80SX8 Gm8770-201ENSMUST00000121113 1109 ntBASIC18.87■□□□□ 0.61
Pif1Q80SX8 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.87■□□□□ 0.61
Pif1Q80SX8 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pif1Q80SX8 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Pif1Q80SX8 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC18.87■□□□□ 0.61
Pif1Q80SX8 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Pif1Q80SX8 AC115037.1-201ENSMUST00000223391 2173 ntBASIC18.87■□□□□ 0.61
Pif1Q80SX8 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.87■□□□□ 0.61
Pif1Q80SX8 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pif1Q80SX8 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Pif1Q80SX8 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.87■□□□□ 0.61
Pif1Q80SX8 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Pif1Q80SX8 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pif1Q80SX8 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Pif1Q80SX8 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pif1Q80SX8 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pif1Q80SX8 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Pif1Q80SX8 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC18.86■□□□□ 0.61
Pif1Q80SX8 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pif1Q80SX8 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Pif1Q80SX8 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Pif1Q80SX8 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pif1Q80SX8 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pif1Q80SX8 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
Pif1Q80SX8 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Pif1Q80SX8 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pif1Q80SX8 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Pif1Q80SX8 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pif1Q80SX8 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Pif1Q80SX8 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms