Protein–RNA interactions for Protein: Q7TQ48

Srl, Sarcalumenin, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SrlQ7TQ48 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
SrlQ7TQ48 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SrlQ7TQ48 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SrlQ7TQ48 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
SrlQ7TQ48 Gm10399-202ENSMUST00000202768 748 ntBASIC21.36■■□□□ 1.01
SrlQ7TQ48 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC21.36■■□□□ 1.01
SrlQ7TQ48 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC21.36■■□□□ 1.01
SrlQ7TQ48 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SrlQ7TQ48 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SrlQ7TQ48 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SrlQ7TQ48 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SrlQ7TQ48 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SrlQ7TQ48 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC21.35■■□□□ 1.01
SrlQ7TQ48 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
SrlQ7TQ48 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SrlQ7TQ48 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC21.34■■□□□ 1.01
SrlQ7TQ48 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC21.34■■□□□ 1.01
SrlQ7TQ48 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC21.34■■□□□ 1.01
SrlQ7TQ48 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
SrlQ7TQ48 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SrlQ7TQ48 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SrlQ7TQ48 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SrlQ7TQ48 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC21.33■■□□□ 1.01
SrlQ7TQ48 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SrlQ7TQ48 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC21.33■■□□□ 1.01
SrlQ7TQ48 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC21.33■■□□□ 1.01
SrlQ7TQ48 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SrlQ7TQ48 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SrlQ7TQ48 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
SrlQ7TQ48 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
SrlQ7TQ48 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
SrlQ7TQ48 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC21.33■■□□□ 1
SrlQ7TQ48 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
SrlQ7TQ48 Gm43006-201ENSMUST00000197702 1602 ntBASIC21.33■■□□□ 1
SrlQ7TQ48 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SrlQ7TQ48 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SrlQ7TQ48 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SrlQ7TQ48 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SrlQ7TQ48 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC21.31■■□□□ 1
SrlQ7TQ48 Gm5131-201ENSMUST00000212776 1238 ntBASIC21.31■■□□□ 1
SrlQ7TQ48 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC21.31■■□□□ 1
SrlQ7TQ48 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SrlQ7TQ48 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
SrlQ7TQ48 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
SrlQ7TQ48 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC21.31■■□□□ 1
SrlQ7TQ48 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
SrlQ7TQ48 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SrlQ7TQ48 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
SrlQ7TQ48 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SrlQ7TQ48 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SrlQ7TQ48 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC21.3■■□□□ 1
SrlQ7TQ48 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC21.3■■□□□ 1
SrlQ7TQ48 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC21.3■■□□□ 1
SrlQ7TQ48 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SrlQ7TQ48 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC21.3■■□□□ 1
SrlQ7TQ48 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
SrlQ7TQ48 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SrlQ7TQ48 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SrlQ7TQ48 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC21.29■■□□□ 1
SrlQ7TQ48 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SrlQ7TQ48 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SrlQ7TQ48 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
SrlQ7TQ48 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
SrlQ7TQ48 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
SrlQ7TQ48 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SrlQ7TQ48 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SrlQ7TQ48 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SrlQ7TQ48 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC21.28■■□□□ 1
SrlQ7TQ48 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC21.28■■□□□ 1
SrlQ7TQ48 AC093043.1-201ENSMUST00000226700 898 ntBASIC21.28■■□□□ 1
SrlQ7TQ48 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SrlQ7TQ48 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SrlQ7TQ48 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
SrlQ7TQ48 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
SrlQ7TQ48 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SrlQ7TQ48 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
SrlQ7TQ48 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SrlQ7TQ48 Gm10620-201ENSMUST00000098379 1332 ntBASIC21.28■■□□□ 1
SrlQ7TQ48 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SrlQ7TQ48 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SrlQ7TQ48 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
SrlQ7TQ48 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
SrlQ7TQ48 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC21.27■■□□□ 1
SrlQ7TQ48 Gm40881-201ENSMUST00000223397 166 ntBASIC21.27■■□□□ 1
SrlQ7TQ48 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SrlQ7TQ48 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SrlQ7TQ48 Gm43403-201ENSMUST00000198011 1786 ntBASIC21.27■■□□□ 1
SrlQ7TQ48 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC21.27■■□□□ 1
SrlQ7TQ48 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SrlQ7TQ48 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SrlQ7TQ48 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SrlQ7TQ48 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC21.26■□□□□ 0.99
SrlQ7TQ48 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
SrlQ7TQ48 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SrlQ7TQ48 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SrlQ7TQ48 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SrlQ7TQ48 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SrlQ7TQ48 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SrlQ7TQ48 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SrlQ7TQ48 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 11.9 ms