Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Casc4Q6P2L7 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Casc4Q6P2L7 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Casc4Q6P2L7 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.75■□□□□ 0.91
Casc4Q6P2L7 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Casc4Q6P2L7 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Casc4Q6P2L7 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Casc4Q6P2L7 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Casc4Q6P2L7 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Casc4Q6P2L7 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Casc4Q6P2L7 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Casc4Q6P2L7 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.74■□□□□ 0.91
Casc4Q6P2L7 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.74■□□□□ 0.91
Casc4Q6P2L7 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Casc4Q6P2L7 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Casc4Q6P2L7 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Casc4Q6P2L7 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.73■□□□□ 0.91
Casc4Q6P2L7 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.73■□□□□ 0.91
Casc4Q6P2L7 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.73■□□□□ 0.91
Casc4Q6P2L7 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Casc4Q6P2L7 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Casc4Q6P2L7 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Casc4Q6P2L7 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Casc4Q6P2L7 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Casc4Q6P2L7 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.72■□□□□ 0.91
Casc4Q6P2L7 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Casc4Q6P2L7 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Casc4Q6P2L7 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Casc4Q6P2L7 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Casc4Q6P2L7 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.72■□□□□ 0.91
Casc4Q6P2L7 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Casc4Q6P2L7 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Casc4Q6P2L7 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.71■□□□□ 0.91
Casc4Q6P2L7 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Casc4Q6P2L7 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Casc4Q6P2L7 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.71■□□□□ 0.91
Casc4Q6P2L7 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.71■□□□□ 0.91
Casc4Q6P2L7 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Casc4Q6P2L7 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.71■□□□□ 0.91
Casc4Q6P2L7 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Casc4Q6P2L7 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.71■□□□□ 0.91
Casc4Q6P2L7 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.71■□□□□ 0.91
Casc4Q6P2L7 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Casc4Q6P2L7 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Casc4Q6P2L7 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.91
Casc4Q6P2L7 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Casc4Q6P2L7 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Casc4Q6P2L7 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Casc4Q6P2L7 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Casc4Q6P2L7 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Casc4Q6P2L7 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Casc4Q6P2L7 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Casc4Q6P2L7 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Casc4Q6P2L7 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Casc4Q6P2L7 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Casc4Q6P2L7 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Casc4Q6P2L7 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
Casc4Q6P2L7 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Casc4Q6P2L7 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Casc4Q6P2L7 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Casc4Q6P2L7 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Casc4Q6P2L7 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Casc4Q6P2L7 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.68■□□□□ 0.9
Casc4Q6P2L7 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Casc4Q6P2L7 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Casc4Q6P2L7 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Casc4Q6P2L7 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Casc4Q6P2L7 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Casc4Q6P2L7 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.67■□□□□ 0.9
Casc4Q6P2L7 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Casc4Q6P2L7 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Casc4Q6P2L7 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Casc4Q6P2L7 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Casc4Q6P2L7 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Casc4Q6P2L7 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Casc4Q6P2L7 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Casc4Q6P2L7 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Casc4Q6P2L7 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Casc4Q6P2L7 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.66■□□□□ 0.9
Casc4Q6P2L7 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Casc4Q6P2L7 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Casc4Q6P2L7 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Casc4Q6P2L7 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Casc4Q6P2L7 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Casc4Q6P2L7 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Casc4Q6P2L7 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Casc4Q6P2L7 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Casc4Q6P2L7 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Casc4Q6P2L7 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Casc4Q6P2L7 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Casc4Q6P2L7 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.65■□□□□ 0.9
Casc4Q6P2L7 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Casc4Q6P2L7 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Casc4Q6P2L7 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Casc4Q6P2L7 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Casc4Q6P2L7 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Casc4Q6P2L7 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Casc4Q6P2L7 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Casc4Q6P2L7 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Casc4Q6P2L7 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms