Protein–RNA interactions for Protein: Q61189

Clns1a, Methylosome subunit pICln, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clns1aQ61189 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Clns1aQ61189 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Clns1aQ61189 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Clns1aQ61189 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Clns1aQ61189 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Clns1aQ61189 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Clns1aQ61189 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Clns1aQ61189 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Clns1aQ61189 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Clns1aQ61189 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Clns1aQ61189 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Clns1aQ61189 AC167019.3-201ENSMUST00000228225 1266 ntBASIC17.51■□□□□ 0.39
Clns1aQ61189 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Clns1aQ61189 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Clns1aQ61189 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC17.51■□□□□ 0.39
Clns1aQ61189 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Clns1aQ61189 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.51■□□□□ 0.39
Clns1aQ61189 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Clns1aQ61189 Gm11599-201ENSMUST00000118720 878 ntBASIC17.5■□□□□ 0.39
Clns1aQ61189 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Clns1aQ61189 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Clns1aQ61189 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC17.5■□□□□ 0.39
Clns1aQ61189 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Clns1aQ61189 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Clns1aQ61189 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC17.49■□□□□ 0.39
Clns1aQ61189 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clns1aQ61189 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clns1aQ61189 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clns1aQ61189 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Clns1aQ61189 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clns1aQ61189 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clns1aQ61189 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clns1aQ61189 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC17.49■□□□□ 0.39
Clns1aQ61189 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC17.49■□□□□ 0.39
Clns1aQ61189 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clns1aQ61189 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clns1aQ61189 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Clns1aQ61189 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Clns1aQ61189 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.49■□□□□ 0.39
Clns1aQ61189 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Clns1aQ61189 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Clns1aQ61189 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Clns1aQ61189 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Clns1aQ61189 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
Clns1aQ61189 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC17.48■□□□□ 0.39
Clns1aQ61189 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC17.48■□□□□ 0.39
Clns1aQ61189 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Clns1aQ61189 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Clns1aQ61189 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC17.48■□□□□ 0.39
Clns1aQ61189 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Clns1aQ61189 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Clns1aQ61189 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.48■□□□□ 0.39
Clns1aQ61189 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Clns1aQ61189 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.48■□□□□ 0.39
Clns1aQ61189 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Clns1aQ61189 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.47■□□□□ 0.39
Clns1aQ61189 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Clns1aQ61189 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Clns1aQ61189 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Clns1aQ61189 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC17.47■□□□□ 0.39
Clns1aQ61189 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Clns1aQ61189 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Clns1aQ61189 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Clns1aQ61189 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Clns1aQ61189 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Clns1aQ61189 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Clns1aQ61189 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Clns1aQ61189 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Clns1aQ61189 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Clns1aQ61189 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Clns1aQ61189 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Clns1aQ61189 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Clns1aQ61189 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.38
Clns1aQ61189 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Clns1aQ61189 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Clns1aQ61189 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Clns1aQ61189 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC17.45■□□□□ 0.38
Clns1aQ61189 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Clns1aQ61189 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Clns1aQ61189 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Clns1aQ61189 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Clns1aQ61189 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
Clns1aQ61189 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Clns1aQ61189 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Clns1aQ61189 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Clns1aQ61189 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Clns1aQ61189 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Clns1aQ61189 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Clns1aQ61189 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Clns1aQ61189 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Clns1aQ61189 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Clns1aQ61189 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Clns1aQ61189 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Clns1aQ61189 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Clns1aQ61189 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Clns1aQ61189 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clns1aQ61189 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Clns1aQ61189 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clns1aQ61189 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clns1aQ61189 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 12.8 ms