Protein–RNA interactions for Protein: Q61124

Cln3, Battenin, mousemouse

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln3Q61124 AC164629.5-201ENSMUST00000220387 632 ntBASIC22.85■■□□□ 1.25
Cln3Q61124 Spcs1-204ENSMUST00000226782 949 ntBASIC22.85■■□□□ 1.25
Cln3Q61124 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC22.85■■□□□ 1.25
Cln3Q61124 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC22.85■■□□□ 1.25
Cln3Q61124 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Cln3Q61124 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Cln3Q61124 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Cln3Q61124 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Cln3Q61124 Gm29257-201ENSMUST00000186115 639 ntBASIC22.84■■□□□ 1.25
Cln3Q61124 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC22.84■■□□□ 1.25
Cln3Q61124 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Cln3Q61124 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Cln3Q61124 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC22.83■■□□□ 1.25
Cln3Q61124 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Cln3Q61124 Cdc34b-202ENSMUST00000188741 1252 ntBASIC22.83■■□□□ 1.25
Cln3Q61124 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Cln3Q61124 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC22.83■■□□□ 1.25
Cln3Q61124 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC22.83■■□□□ 1.25
Cln3Q61124 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC22.83■■□□□ 1.24
Cln3Q61124 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC22.83■■□□□ 1.24
Cln3Q61124 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Cln3Q61124 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Cln3Q61124 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC22.82■■□□□ 1.24
Cln3Q61124 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC22.82■■□□□ 1.24
Cln3Q61124 Gm7160-202ENSMUST00000188519 1027 ntBASIC22.82■■□□□ 1.24
Cln3Q61124 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Cln3Q61124 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Cln3Q61124 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC22.82■■□□□ 1.24
Cln3Q61124 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
Cln3Q61124 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Cln3Q61124 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Cln3Q61124 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC22.81■■□□□ 1.24
Cln3Q61124 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC22.81■■□□□ 1.24
Cln3Q61124 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC22.81■■□□□ 1.24
Cln3Q61124 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Cln3Q61124 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Cln3Q61124 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
Cln3Q61124 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC22.8■■□□□ 1.24
Cln3Q61124 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC22.8■■□□□ 1.24
Cln3Q61124 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Cln3Q61124 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC22.8■■□□□ 1.24
Cln3Q61124 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC22.8■■□□□ 1.24
Cln3Q61124 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Cln3Q61124 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Cln3Q61124 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Cln3Q61124 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC22.79■■□□□ 1.24
Cln3Q61124 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC22.79■■□□□ 1.24
Cln3Q61124 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Cln3Q61124 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC22.79■■□□□ 1.24
Cln3Q61124 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC22.79■■□□□ 1.24
Cln3Q61124 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC22.79■■□□□ 1.24
Cln3Q61124 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC22.79■■□□□ 1.24
Cln3Q61124 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Cln3Q61124 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Cln3Q61124 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC22.78■■□□□ 1.24
Cln3Q61124 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Cln3Q61124 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC22.78■■□□□ 1.24
Cln3Q61124 Gm26833-201ENSMUST00000180899 440 ntBASIC22.78■■□□□ 1.24
Cln3Q61124 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Cln3Q61124 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Cln3Q61124 AC164883.3-201ENSMUST00000227396 1774 ntBASIC22.78■■□□□ 1.24
Cln3Q61124 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Cln3Q61124 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC22.78■■□□□ 1.24
Cln3Q61124 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC22.77■■□□□ 1.24
Cln3Q61124 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Cln3Q61124 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Cln3Q61124 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC22.77■■□□□ 1.24
Cln3Q61124 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Cln3Q61124 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Cln3Q61124 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC22.77■■□□□ 1.23
Cln3Q61124 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
Cln3Q61124 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Cln3Q61124 Gm42418-201ENSMUST00000182010 1831 ntBASIC22.76■■□□□ 1.23
Cln3Q61124 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Cln3Q61124 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Cln3Q61124 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC22.76■■□□□ 1.23
Cln3Q61124 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Cln3Q61124 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC22.76■■□□□ 1.23
Cln3Q61124 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Cln3Q61124 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Cln3Q61124 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Cln3Q61124 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Cln3Q61124 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Cln3Q61124 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Cln3Q61124 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Cln3Q61124 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Cln3Q61124 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC22.74■■□□□ 1.23
Cln3Q61124 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Cln3Q61124 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
Cln3Q61124 Gm26571-201ENSMUST00000181399 666 ntBASIC22.74■■□□□ 1.23
Cln3Q61124 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Cln3Q61124 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC22.74■■□□□ 1.23
Cln3Q61124 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Cln3Q61124 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Cln3Q61124 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC22.73■■□□□ 1.23
Cln3Q61124 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC22.73■■□□□ 1.23
Cln3Q61124 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
Cln3Q61124 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Cln3Q61124 Gm43060-201ENSMUST00000200621 289 ntBASIC22.73■■□□□ 1.23
Cln3Q61124 Gm40848-201ENSMUST00000221998 324 ntBASIC22.73■■□□□ 1.23
Retrieved 100 of 76,532 protein–RNA pairs in 11.4 ms