Protein–RNA interactions for Protein: Q5M6W3

Clhc1, Clathrin heavy chain linker domain-containing protein 1, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clhc1Q5M6W3 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clhc1Q5M6W3 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clhc1Q5M6W3 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Clhc1Q5M6W3 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Clhc1Q5M6W3 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Clhc1Q5M6W3 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Clhc1Q5M6W3 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC19.71■□□□□ 0.75
Clhc1Q5M6W3 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Clhc1Q5M6W3 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Clhc1Q5M6W3 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Clhc1Q5M6W3 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Clhc1Q5M6W3 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Clhc1Q5M6W3 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Clhc1Q5M6W3 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.71■□□□□ 0.75
Clhc1Q5M6W3 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Clhc1Q5M6W3 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Clhc1Q5M6W3 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clhc1Q5M6W3 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Clhc1Q5M6W3 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clhc1Q5M6W3 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Clhc1Q5M6W3 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clhc1Q5M6W3 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
Clhc1Q5M6W3 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC19.7■□□□□ 0.74
Clhc1Q5M6W3 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clhc1Q5M6W3 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clhc1Q5M6W3 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Clhc1Q5M6W3 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clhc1Q5M6W3 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clhc1Q5M6W3 Gm10420-201ENSMUST00000121713 882 ntBASIC19.69■□□□□ 0.74
Clhc1Q5M6W3 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clhc1Q5M6W3 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clhc1Q5M6W3 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clhc1Q5M6W3 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Clhc1Q5M6W3 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
Clhc1Q5M6W3 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clhc1Q5M6W3 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clhc1Q5M6W3 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.68■□□□□ 0.74
Clhc1Q5M6W3 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clhc1Q5M6W3 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clhc1Q5M6W3 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clhc1Q5M6W3 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clhc1Q5M6W3 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Clhc1Q5M6W3 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clhc1Q5M6W3 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Clhc1Q5M6W3 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.67■□□□□ 0.74
Clhc1Q5M6W3 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.67■□□□□ 0.74
Clhc1Q5M6W3 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.67■□□□□ 0.74
Clhc1Q5M6W3 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Clhc1Q5M6W3 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clhc1Q5M6W3 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clhc1Q5M6W3 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clhc1Q5M6W3 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Clhc1Q5M6W3 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clhc1Q5M6W3 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
Clhc1Q5M6W3 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clhc1Q5M6W3 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Clhc1Q5M6W3 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clhc1Q5M6W3 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.66■□□□□ 0.74
Clhc1Q5M6W3 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Clhc1Q5M6W3 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC19.66■□□□□ 0.74
Clhc1Q5M6W3 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clhc1Q5M6W3 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Clhc1Q5M6W3 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Clhc1Q5M6W3 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Clhc1Q5M6W3 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Clhc1Q5M6W3 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clhc1Q5M6W3 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clhc1Q5M6W3 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Clhc1Q5M6W3 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clhc1Q5M6W3 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Clhc1Q5M6W3 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clhc1Q5M6W3 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clhc1Q5M6W3 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
Clhc1Q5M6W3 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Clhc1Q5M6W3 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Clhc1Q5M6W3 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
Clhc1Q5M6W3 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Clhc1Q5M6W3 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Clhc1Q5M6W3 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC19.64■□□□□ 0.73
Clhc1Q5M6W3 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.64■□□□□ 0.73
Clhc1Q5M6W3 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Clhc1Q5M6W3 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Clhc1Q5M6W3 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Clhc1Q5M6W3 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Clhc1Q5M6W3 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Clhc1Q5M6W3 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Clhc1Q5M6W3 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.64■□□□□ 0.73
Clhc1Q5M6W3 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Clhc1Q5M6W3 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Clhc1Q5M6W3 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Clhc1Q5M6W3 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Clhc1Q5M6W3 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.63■□□□□ 0.73
Clhc1Q5M6W3 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Clhc1Q5M6W3 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Clhc1Q5M6W3 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Clhc1Q5M6W3 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Clhc1Q5M6W3 Gm5067-201ENSMUST00000170449 1009 ntBASIC19.63■□□□□ 0.73
Clhc1Q5M6W3 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Clhc1Q5M6W3 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Clhc1Q5M6W3 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms