Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Col10a1Q05306 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col10a1Q05306 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col10a1Q05306 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col10a1Q05306 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC18.93■□□□□ 0.62
Col10a1Q05306 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Col10a1Q05306 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col10a1Q05306 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col10a1Q05306 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Col10a1Q05306 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Col10a1Q05306 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC18.93■□□□□ 0.62
Col10a1Q05306 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col10a1Q05306 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Col10a1Q05306 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Col10a1Q05306 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col10a1Q05306 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC18.92■□□□□ 0.62
Col10a1Q05306 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col10a1Q05306 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col10a1Q05306 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC18.92■□□□□ 0.62
Col10a1Q05306 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Col10a1Q05306 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Col10a1Q05306 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
Col10a1Q05306 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
Col10a1Q05306 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Col10a1Q05306 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Col10a1Q05306 Gm22238-201ENSMUST00000175222 88 ntBASIC18.91■□□□□ 0.62
Col10a1Q05306 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC18.91■□□□□ 0.62
Col10a1Q05306 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Col10a1Q05306 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Col10a1Q05306 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Col10a1Q05306 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Col10a1Q05306 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.91■□□□□ 0.62
Col10a1Q05306 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Col10a1Q05306 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC18.91■□□□□ 0.62
Col10a1Q05306 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Col10a1Q05306 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Col10a1Q05306 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Col10a1Q05306 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Col10a1Q05306 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
Col10a1Q05306 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
Col10a1Q05306 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Col10a1Q05306 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC18.89■□□□□ 0.61
Col10a1Q05306 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC18.89■□□□□ 0.61
Col10a1Q05306 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Col10a1Q05306 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Col10a1Q05306 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Col10a1Q05306 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Col10a1Q05306 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Col10a1Q05306 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Col10a1Q05306 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Col10a1Q05306 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Col10a1Q05306 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Col10a1Q05306 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Col10a1Q05306 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Col10a1Q05306 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Col10a1Q05306 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Col10a1Q05306 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Col10a1Q05306 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.88■□□□□ 0.61
Col10a1Q05306 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Col10a1Q05306 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Col10a1Q05306 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Col10a1Q05306 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Col10a1Q05306 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Col10a1Q05306 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Col10a1Q05306 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.87■□□□□ 0.61
Col10a1Q05306 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Col10a1Q05306 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Col10a1Q05306 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.86■□□□□ 0.61
Col10a1Q05306 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col10a1Q05306 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col10a1Q05306 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col10a1Q05306 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col10a1Q05306 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col10a1Q05306 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Col10a1Q05306 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Col10a1Q05306 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col10a1Q05306 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col10a1Q05306 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC18.85■□□□□ 0.61
Col10a1Q05306 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col10a1Q05306 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC18.85■□□□□ 0.61
Col10a1Q05306 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col10a1Q05306 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col10a1Q05306 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col10a1Q05306 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
Col10a1Q05306 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Col10a1Q05306 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC18.84■□□□□ 0.61
Col10a1Q05306 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col10a1Q05306 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col10a1Q05306 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Col10a1Q05306 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Col10a1Q05306 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Col10a1Q05306 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Col10a1Q05306 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Col10a1Q05306 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Col10a1Q05306 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC18.83■□□□□ 0.6
Col10a1Q05306 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC18.83■□□□□ 0.6
Col10a1Q05306 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC18.83■□□□□ 0.6
Col10a1Q05306 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.83■□□□□ 0.6
Col10a1Q05306 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Col10a1Q05306 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms