Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Thumpd3P97770 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Thumpd3P97770 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Thumpd3P97770 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Thumpd3P97770 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Thumpd3P97770 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.77■□□□□ 0.92
Thumpd3P97770 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.91
Thumpd3P97770 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Thumpd3P97770 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Thumpd3P97770 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Thumpd3P97770 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC20.76■□□□□ 0.91
Thumpd3P97770 Rps24-207ENSMUST00000224568 714 ntBASIC20.76■□□□□ 0.91
Thumpd3P97770 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Thumpd3P97770 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Thumpd3P97770 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Thumpd3P97770 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Thumpd3P97770 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Thumpd3P97770 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Thumpd3P97770 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Thumpd3P97770 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Thumpd3P97770 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Thumpd3P97770 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Thumpd3P97770 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Thumpd3P97770 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Thumpd3P97770 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Thumpd3P97770 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Thumpd3P97770 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Thumpd3P97770 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Thumpd3P97770 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Thumpd3P97770 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Thumpd3P97770 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
Thumpd3P97770 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.73■□□□□ 0.91
Thumpd3P97770 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.73■□□□□ 0.91
Thumpd3P97770 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.73■□□□□ 0.91
Thumpd3P97770 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Thumpd3P97770 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Thumpd3P97770 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Thumpd3P97770 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.72■□□□□ 0.91
Thumpd3P97770 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Thumpd3P97770 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Thumpd3P97770 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Thumpd3P97770 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Thumpd3P97770 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.71■□□□□ 0.91
Thumpd3P97770 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20.71■□□□□ 0.91
Thumpd3P97770 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Thumpd3P97770 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Thumpd3P97770 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Thumpd3P97770 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Thumpd3P97770 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Thumpd3P97770 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.7■□□□□ 0.91
Thumpd3P97770 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
Thumpd3P97770 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Thumpd3P97770 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Thumpd3P97770 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Thumpd3P97770 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Thumpd3P97770 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Thumpd3P97770 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Thumpd3P97770 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Thumpd3P97770 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Thumpd3P97770 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.7■□□□□ 0.9
Thumpd3P97770 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Thumpd3P97770 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Thumpd3P97770 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Thumpd3P97770 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Thumpd3P97770 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Thumpd3P97770 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Thumpd3P97770 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
Thumpd3P97770 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Thumpd3P97770 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Thumpd3P97770 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Thumpd3P97770 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Thumpd3P97770 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Thumpd3P97770 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Thumpd3P97770 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Thumpd3P97770 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Thumpd3P97770 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.69■□□□□ 0.9
Thumpd3P97770 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Thumpd3P97770 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Thumpd3P97770 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Thumpd3P97770 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Thumpd3P97770 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Thumpd3P97770 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Thumpd3P97770 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
Thumpd3P97770 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.68■□□□□ 0.9
Thumpd3P97770 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.68■□□□□ 0.9
Thumpd3P97770 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Thumpd3P97770 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.68■□□□□ 0.9
Thumpd3P97770 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Thumpd3P97770 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Thumpd3P97770 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Thumpd3P97770 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Thumpd3P97770 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
Thumpd3P97770 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Thumpd3P97770 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Thumpd3P97770 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Thumpd3P97770 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Thumpd3P97770 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Thumpd3P97770 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Thumpd3P97770 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Thumpd3P97770 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms