Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Cdh11P55288 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cdh11P55288 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cdh11P55288 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cdh11P55288 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cdh11P55288 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cdh11P55288 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cdh11P55288 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cdh11P55288 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cdh11P55288 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cdh11P55288 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cdh11P55288 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cdh11P55288 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC18.58■□□□□ 0.57
Cdh11P55288 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cdh11P55288 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cdh11P55288 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cdh11P55288 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cdh11P55288 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Cdh11P55288 Gm10232-201ENSMUST00000089221 720 ntBASIC18.58■□□□□ 0.56
Cdh11P55288 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cdh11P55288 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cdh11P55288 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cdh11P55288 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Cdh11P55288 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC18.57■□□□□ 0.56
Cdh11P55288 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cdh11P55288 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cdh11P55288 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cdh11P55288 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cdh11P55288 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cdh11P55288 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cdh11P55288 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cdh11P55288 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cdh11P55288 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cdh11P55288 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cdh11P55288 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cdh11P55288 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cdh11P55288 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC18.56■□□□□ 0.56
Cdh11P55288 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cdh11P55288 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cdh11P55288 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC18.56■□□□□ 0.56
Cdh11P55288 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cdh11P55288 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cdh11P55288 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cdh11P55288 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cdh11P55288 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.55■□□□□ 0.56
Cdh11P55288 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cdh11P55288 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cdh11P55288 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cdh11P55288 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cdh11P55288 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cdh11P55288 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cdh11P55288 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cdh11P55288 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cdh11P55288 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cdh11P55288 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cdh11P55288 Gm4430-201ENSMUST00000192413 1943 ntBASIC18.55■□□□□ 0.56
Cdh11P55288 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cdh11P55288 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.54■□□□□ 0.56
Cdh11P55288 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cdh11P55288 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC18.54■□□□□ 0.56
Cdh11P55288 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC18.54■□□□□ 0.56
Cdh11P55288 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cdh11P55288 AC164883.3-201ENSMUST00000227396 1774 ntBASIC18.54■□□□□ 0.56
Cdh11P55288 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cdh11P55288 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
Cdh11P55288 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.54■□□□□ 0.56
Cdh11P55288 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cdh11P55288 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdh11P55288 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
Cdh11P55288 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Cdh11P55288 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cdh11P55288 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC18.53■□□□□ 0.56
Cdh11P55288 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdh11P55288 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdh11P55288 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdh11P55288 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdh11P55288 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Cdh11P55288 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.53■□□□□ 0.56
Cdh11P55288 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cdh11P55288 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cdh11P55288 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Cdh11P55288 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cdh11P55288 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Cdh11P55288 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cdh11P55288 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cdh11P55288 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cdh11P55288 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
Cdh11P55288 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cdh11P55288 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.55
Cdh11P55288 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cdh11P55288 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cdh11P55288 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Cdh11P55288 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cdh11P55288 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cdh11P55288 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Cdh11P55288 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cdh11P55288 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cdh11P55288 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Cdh11P55288 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Cdh11P55288 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 72.1 ms