Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Gm21168-201ENSMUST00000199646 1096 ntBASIC21.93■■□□□ 1.1
NrlP54846 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
NrlP54846 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
NrlP54846 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
NrlP54846 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
NrlP54846 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
NrlP54846 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
NrlP54846 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NrlP54846 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NrlP54846 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NrlP54846 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
NrlP54846 Gm10657-201ENSMUST00000193528 1031 ntBASIC21.92■■□□□ 1.1
NrlP54846 Gm26766-202ENSMUST00000227544 2347 ntBASIC21.92■■□□□ 1.1
NrlP54846 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NrlP54846 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
NrlP54846 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NrlP54846 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NrlP54846 Gm4430-201ENSMUST00000192413 1943 ntBASIC21.91■■□□□ 1.1
NrlP54846 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC21.91■■□□□ 1.1
NrlP54846 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC21.91■■□□□ 1.1
NrlP54846 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC21.91■■□□□ 1.1
NrlP54846 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NrlP54846 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NrlP54846 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
NrlP54846 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
NrlP54846 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NrlP54846 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
NrlP54846 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NrlP54846 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NrlP54846 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
NrlP54846 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
NrlP54846 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
NrlP54846 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC21.9■■□□□ 1.1
NrlP54846 Gm43017-201ENSMUST00000198296 752 ntBASIC21.9■■□□□ 1.1
NrlP54846 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.9■■□□□ 1.1
NrlP54846 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
NrlP54846 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC21.9■■□□□ 1.1
NrlP54846 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC21.9■■□□□ 1.1
NrlP54846 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC21.89■■□□□ 1.1
NrlP54846 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
NrlP54846 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
NrlP54846 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
NrlP54846 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
NrlP54846 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
NrlP54846 Kdm3b-204ENSMUST00000224715 2032 ntBASIC21.89■■□□□ 1.09
NrlP54846 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
NrlP54846 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
NrlP54846 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
NrlP54846 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC21.88■■□□□ 1.09
NrlP54846 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
NrlP54846 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC21.88■■□□□ 1.09
NrlP54846 Gm7143-201ENSMUST00000222811 859 ntBASIC21.88■■□□□ 1.09
NrlP54846 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
NrlP54846 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
NrlP54846 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
NrlP54846 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC21.88■■□□□ 1.09
NrlP54846 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC21.88■■□□□ 1.09
NrlP54846 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
NrlP54846 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
NrlP54846 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
NrlP54846 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
NrlP54846 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
NrlP54846 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
NrlP54846 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC21.86■■□□□ 1.09
NrlP54846 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC21.86■■□□□ 1.09
NrlP54846 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
NrlP54846 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC21.86■■□□□ 1.09
NrlP54846 Gm8770-201ENSMUST00000121113 1109 ntBASIC21.86■■□□□ 1.09
NrlP54846 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
NrlP54846 Gm8493-201ENSMUST00000196881 489 ntBASIC21.86■■□□□ 1.09
NrlP54846 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
NrlP54846 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC21.86■■□□□ 1.09
NrlP54846 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
NrlP54846 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21.85■■□□□ 1.09
NrlP54846 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
NrlP54846 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC21.85■■□□□ 1.09
NrlP54846 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
NrlP54846 Gm5576-201ENSMUST00000075809 1236 ntBASIC21.85■■□□□ 1.09
NrlP54846 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
NrlP54846 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
NrlP54846 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
NrlP54846 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
NrlP54846 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
NrlP54846 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
NrlP54846 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
NrlP54846 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC21.84■■□□□ 1.09
NrlP54846 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
NrlP54846 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
NrlP54846 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.84■■□□□ 1.09
NrlP54846 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.09
NrlP54846 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
NrlP54846 Wdr70-203ENSMUST00000227371 1130 ntBASIC21.83■■□□□ 1.09
NrlP54846 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
NrlP54846 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
NrlP54846 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
NrlP54846 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NrlP54846 Gm43759-201ENSMUST00000196925 1261 ntBASIC21.82■■□□□ 1.08
NrlP54846 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
NrlP54846 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
NrlP54846 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms