Protein–RNA interactions for Protein: P41245

Mmp9, Matrix metalloproteinase-9, mousemouse

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp9P41245 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mmp9P41245 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mmp9P41245 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Mmp9P41245 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mmp9P41245 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC17.11■□□□□ 0.33
Mmp9P41245 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mmp9P41245 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Mmp9P41245 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mmp9P41245 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mmp9P41245 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mmp9P41245 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Mmp9P41245 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC17.1■□□□□ 0.33
Mmp9P41245 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Mmp9P41245 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mmp9P41245 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Mmp9P41245 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mmp9P41245 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mmp9P41245 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mmp9P41245 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mmp9P41245 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mmp9P41245 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Mmp9P41245 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mmp9P41245 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.09■□□□□ 0.33
Mmp9P41245 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mmp9P41245 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mmp9P41245 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
Mmp9P41245 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Mmp9P41245 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Mmp9P41245 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Mmp9P41245 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Mmp9P41245 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Mmp9P41245 Gm44949-201ENSMUST00000206423 1450 ntBASIC17.08■□□□□ 0.32
Mmp9P41245 Gm7332-201ENSMUST00000118351 454 ntBASIC17.08■□□□□ 0.32
Mmp9P41245 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC17.08■□□□□ 0.32
Mmp9P41245 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Mmp9P41245 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Mmp9P41245 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.08■□□□□ 0.32
Mmp9P41245 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Mmp9P41245 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Mmp9P41245 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Mmp9P41245 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
Mmp9P41245 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Mmp9P41245 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Mmp9P41245 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Mmp9P41245 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Mmp9P41245 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Mmp9P41245 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Mmp9P41245 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC17.07■□□□□ 0.32
Mmp9P41245 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Mmp9P41245 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Mmp9P41245 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Mmp9P41245 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Mmp9P41245 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Mmp9P41245 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.06■□□□□ 0.32
Mmp9P41245 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Mmp9P41245 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Mmp9P41245 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mmp9P41245 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mmp9P41245 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mmp9P41245 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mmp9P41245 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Mmp9P41245 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mmp9P41245 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mmp9P41245 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mmp9P41245 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
Mmp9P41245 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC17.05■□□□□ 0.32
Mmp9P41245 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mmp9P41245 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mmp9P41245 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Mmp9P41245 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Mmp9P41245 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Mmp9P41245 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
Mmp9P41245 Pkd1-207ENSMUST00000228550 1050 ntBASIC17.04■□□□□ 0.32
Mmp9P41245 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mmp9P41245 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Mmp9P41245 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Mmp9P41245 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mmp9P41245 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.03■□□□□ 0.32
Mmp9P41245 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mmp9P41245 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Mmp9P41245 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Mmp9P41245 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC17.03■□□□□ 0.32
Mmp9P41245 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Mmp9P41245 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC17.03■□□□□ 0.32
Mmp9P41245 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mmp9P41245 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mmp9P41245 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mmp9P41245 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mmp9P41245 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Mmp9P41245 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Mmp9P41245 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Mmp9P41245 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Mmp9P41245 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Mmp9P41245 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Mmp9P41245 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Mmp9P41245 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC17.02■□□□□ 0.32
Mmp9P41245 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Mmp9P41245 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Mmp9P41245 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Mmp9P41245 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms