Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Tnfrsf1aP25118 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC17.17■□□□□ 0.34
Tnfrsf1aP25118 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tnfrsf1aP25118 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tnfrsf1aP25118 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tnfrsf1aP25118 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tnfrsf1aP25118 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tnfrsf1aP25118 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Tnfrsf1aP25118 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Tnfrsf1aP25118 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tnfrsf1aP25118 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tnfrsf1aP25118 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tnfrsf1aP25118 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tnfrsf1aP25118 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tnfrsf1aP25118 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Tnfrsf1aP25118 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tnfrsf1aP25118 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tnfrsf1aP25118 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Tnfrsf1aP25118 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tnfrsf1aP25118 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
Tnfrsf1aP25118 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC17.15■□□□□ 0.34
Tnfrsf1aP25118 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tnfrsf1aP25118 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
Tnfrsf1aP25118 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tnfrsf1aP25118 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tnfrsf1aP25118 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Tnfrsf1aP25118 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
Tnfrsf1aP25118 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tnfrsf1aP25118 Gm16464-201ENSMUST00000117815 1095 ntBASIC17.15■□□□□ 0.34
Tnfrsf1aP25118 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tnfrsf1aP25118 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tnfrsf1aP25118 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Tnfrsf1aP25118 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tnfrsf1aP25118 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tnfrsf1aP25118 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tnfrsf1aP25118 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tnfrsf1aP25118 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tnfrsf1aP25118 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Tnfrsf1aP25118 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tnfrsf1aP25118 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tnfrsf1aP25118 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tnfrsf1aP25118 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tnfrsf1aP25118 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tnfrsf1aP25118 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Tnfrsf1aP25118 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tnfrsf1aP25118 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tnfrsf1aP25118 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tnfrsf1aP25118 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tnfrsf1aP25118 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Tnfrsf1aP25118 Gm43566-201ENSMUST00000196851 808 ntBASIC17.13■□□□□ 0.33
Tnfrsf1aP25118 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tnfrsf1aP25118 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Tnfrsf1aP25118 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Tnfrsf1aP25118 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Tnfrsf1aP25118 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
Tnfrsf1aP25118 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Tnfrsf1aP25118 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tnfrsf1aP25118 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
Tnfrsf1aP25118 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tnfrsf1aP25118 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tnfrsf1aP25118 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC17.12■□□□□ 0.33
Tnfrsf1aP25118 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC17.12■□□□□ 0.33
Tnfrsf1aP25118 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tnfrsf1aP25118 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tnfrsf1aP25118 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Tnfrsf1aP25118 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tnfrsf1aP25118 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tnfrsf1aP25118 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC17.11■□□□□ 0.33
Tnfrsf1aP25118 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tnfrsf1aP25118 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Tnfrsf1aP25118 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tnfrsf1aP25118 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tnfrsf1aP25118 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Tnfrsf1aP25118 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tnfrsf1aP25118 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC17.1■□□□□ 0.33
Tnfrsf1aP25118 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tnfrsf1aP25118 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Tnfrsf1aP25118 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tnfrsf1aP25118 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tnfrsf1aP25118 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tnfrsf1aP25118 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tnfrsf1aP25118 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tnfrsf1aP25118 Gm13238-201ENSMUST00000117655 780 ntBASIC17.09■□□□□ 0.33
Tnfrsf1aP25118 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tnfrsf1aP25118 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Tnfrsf1aP25118 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tnfrsf1aP25118 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Tnfrsf1aP25118 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tnfrsf1aP25118 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tnfrsf1aP25118 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tnfrsf1aP25118 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.09■□□□□ 0.33
Tnfrsf1aP25118 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tnfrsf1aP25118 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Tnfrsf1aP25118 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Tnfrsf1aP25118 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Tnfrsf1aP25118 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Tnfrsf1aP25118 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Tnfrsf1aP25118 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Tnfrsf1aP25118 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tnfrsf1aP25118 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms