Protein–RNA interactions for Protein: P04441

Cd74, H-2 class II histocompatibility antigen gamma chain, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd74P04441 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cd74P04441 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cd74P04441 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cd74P04441 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cd74P04441 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cd74P04441 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cd74P04441 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cd74P04441 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cd74P04441 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cd74P04441 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cd74P04441 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cd74P04441 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC17.11■□□□□ 0.33
Cd74P04441 Gm10399-202ENSMUST00000202768 748 ntBASIC17.11■□□□□ 0.33
Cd74P04441 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cd74P04441 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC17.11■□□□□ 0.33
Cd74P04441 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cd74P04441 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cd74P04441 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC17.11■□□□□ 0.33
Cd74P04441 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cd74P04441 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cd74P04441 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cd74P04441 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cd74P04441 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cd74P04441 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cd74P04441 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cd74P04441 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cd74P04441 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC17.1■□□□□ 0.33
Cd74P04441 Gm40881-201ENSMUST00000223397 166 ntBASIC17.1■□□□□ 0.33
Cd74P04441 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cd74P04441 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Cd74P04441 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC17.1■□□□□ 0.33
Cd74P04441 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC17.1■□□□□ 0.33
Cd74P04441 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cd74P04441 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cd74P04441 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC17.09■□□□□ 0.33
Cd74P04441 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC17.09■□□□□ 0.33
Cd74P04441 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC17.09■□□□□ 0.33
Cd74P04441 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cd74P04441 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Cd74P04441 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cd74P04441 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cd74P04441 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cd74P04441 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Cd74P04441 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
Cd74P04441 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
Cd74P04441 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC17.08■□□□□ 0.32
Cd74P04441 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cd74P04441 Nsd1-206ENSMUST00000224918 1001 ntBASIC17.08■□□□□ 0.32
Cd74P04441 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cd74P04441 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Cd74P04441 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cd74P04441 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cd74P04441 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cd74P04441 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cd74P04441 Gm34220-201ENSMUST00000223001 2709 ntBASIC17.07■□□□□ 0.32
Cd74P04441 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cd74P04441 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cd74P04441 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cd74P04441 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Cd74P04441 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Cd74P04441 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cd74P04441 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cd74P04441 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cd74P04441 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cd74P04441 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cd74P04441 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cd74P04441 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cd74P04441 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Cd74P04441 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cd74P04441 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cd74P04441 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.06■□□□□ 0.32
Cd74P04441 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Cd74P04441 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cd74P04441 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cd74P04441 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cd74P04441 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cd74P04441 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC17.05■□□□□ 0.32
Cd74P04441 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cd74P04441 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Cd74P04441 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cd74P04441 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC17.05■□□□□ 0.32
Cd74P04441 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cd74P04441 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cd74P04441 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cd74P04441 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cd74P04441 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cd74P04441 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cd74P04441 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cd74P04441 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC17.04■□□□□ 0.32
Cd74P04441 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cd74P04441 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cd74P04441 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cd74P04441 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Cd74P04441 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cd74P04441 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cd74P04441 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cd74P04441 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC17.03■□□□□ 0.32
Cd74P04441 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC17.03■□□□□ 0.32
Cd74P04441 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cd74P04441 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms