Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Shisa8J3QNX5 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Shisa8J3QNX5 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Shisa8J3QNX5 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Shisa8J3QNX5 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Shisa8J3QNX5 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.72■□□□□ 0.59
Shisa8J3QNX5 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Shisa8J3QNX5 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Shisa8J3QNX5 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Shisa8J3QNX5 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Shisa8J3QNX5 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Shisa8J3QNX5 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Shisa8J3QNX5 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Shisa8J3QNX5 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Shisa8J3QNX5 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Shisa8J3QNX5 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Shisa8J3QNX5 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Shisa8J3QNX5 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Shisa8J3QNX5 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Shisa8J3QNX5 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Shisa8J3QNX5 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Shisa8J3QNX5 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Shisa8J3QNX5 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Shisa8J3QNX5 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Shisa8J3QNX5 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Shisa8J3QNX5 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Shisa8J3QNX5 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Shisa8J3QNX5 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Shisa8J3QNX5 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Shisa8J3QNX5 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Shisa8J3QNX5 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Shisa8J3QNX5 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Shisa8J3QNX5 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Shisa8J3QNX5 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC18.7■□□□□ 0.58
Shisa8J3QNX5 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Shisa8J3QNX5 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.7■□□□□ 0.58
Shisa8J3QNX5 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Shisa8J3QNX5 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Shisa8J3QNX5 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.69■□□□□ 0.58
Shisa8J3QNX5 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Shisa8J3QNX5 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Shisa8J3QNX5 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Shisa8J3QNX5 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Shisa8J3QNX5 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Shisa8J3QNX5 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Shisa8J3QNX5 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Shisa8J3QNX5 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.68■□□□□ 0.58
Shisa8J3QNX5 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Shisa8J3QNX5 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Shisa8J3QNX5 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.68■□□□□ 0.58
Shisa8J3QNX5 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC18.68■□□□□ 0.58
Shisa8J3QNX5 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Shisa8J3QNX5 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Shisa8J3QNX5 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Shisa8J3QNX5 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Shisa8J3QNX5 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.67■□□□□ 0.58
Shisa8J3QNX5 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Shisa8J3QNX5 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Shisa8J3QNX5 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Shisa8J3QNX5 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Shisa8J3QNX5 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.67■□□□□ 0.58
Shisa8J3QNX5 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Shisa8J3QNX5 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Shisa8J3QNX5 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Shisa8J3QNX5 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Shisa8J3QNX5 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.66■□□□□ 0.58
Shisa8J3QNX5 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Shisa8J3QNX5 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Shisa8J3QNX5 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Shisa8J3QNX5 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.66■□□□□ 0.58
Shisa8J3QNX5 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Shisa8J3QNX5 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Shisa8J3QNX5 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Shisa8J3QNX5 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.65■□□□□ 0.58
Shisa8J3QNX5 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Shisa8J3QNX5 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Shisa8J3QNX5 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Shisa8J3QNX5 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Shisa8J3QNX5 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Shisa8J3QNX5 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Shisa8J3QNX5 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
Shisa8J3QNX5 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Shisa8J3QNX5 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Shisa8J3QNX5 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Shisa8J3QNX5 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Shisa8J3QNX5 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Shisa8J3QNX5 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Shisa8J3QNX5 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.64■□□□□ 0.58
Shisa8J3QNX5 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Shisa8J3QNX5 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Shisa8J3QNX5 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Shisa8J3QNX5 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC18.64■□□□□ 0.57
Shisa8J3QNX5 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC18.64■□□□□ 0.57
Shisa8J3QNX5 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Shisa8J3QNX5 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Shisa8J3QNX5 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Shisa8J3QNX5 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Shisa8J3QNX5 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Shisa8J3QNX5 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Shisa8J3QNX5 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms