Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Shisa8J3QNX5 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Shisa8J3QNX5 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Shisa8J3QNX5 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Shisa8J3QNX5 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Shisa8J3QNX5 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.72■□□□□ 0.59
Shisa8J3QNX5 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Shisa8J3QNX5 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Shisa8J3QNX5 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Shisa8J3QNX5 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Shisa8J3QNX5 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Shisa8J3QNX5 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Shisa8J3QNX5 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Shisa8J3QNX5 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Shisa8J3QNX5 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Shisa8J3QNX5 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Shisa8J3QNX5 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Shisa8J3QNX5 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Shisa8J3QNX5 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Shisa8J3QNX5 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Shisa8J3QNX5 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Shisa8J3QNX5 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Shisa8J3QNX5 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Shisa8J3QNX5 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Shisa8J3QNX5 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Shisa8J3QNX5 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Shisa8J3QNX5 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Shisa8J3QNX5 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Shisa8J3QNX5 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Shisa8J3QNX5 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Shisa8J3QNX5 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Shisa8J3QNX5 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Shisa8J3QNX5 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Shisa8J3QNX5 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC18.7■□□□□ 0.58
Shisa8J3QNX5 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Shisa8J3QNX5 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.7■□□□□ 0.58
Shisa8J3QNX5 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Shisa8J3QNX5 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Shisa8J3QNX5 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.69■□□□□ 0.58
Shisa8J3QNX5 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Shisa8J3QNX5 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Shisa8J3QNX5 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Shisa8J3QNX5 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Shisa8J3QNX5 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Shisa8J3QNX5 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Shisa8J3QNX5 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Shisa8J3QNX5 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.68■□□□□ 0.58
Shisa8J3QNX5 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Shisa8J3QNX5 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Shisa8J3QNX5 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.68■□□□□ 0.58
Shisa8J3QNX5 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC18.68■□□□□ 0.58
Shisa8J3QNX5 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Shisa8J3QNX5 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Shisa8J3QNX5 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Shisa8J3QNX5 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Shisa8J3QNX5 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.67■□□□□ 0.58
Shisa8J3QNX5 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Shisa8J3QNX5 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Shisa8J3QNX5 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Shisa8J3QNX5 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Shisa8J3QNX5 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.67■□□□□ 0.58
Shisa8J3QNX5 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Shisa8J3QNX5 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Shisa8J3QNX5 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Shisa8J3QNX5 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Shisa8J3QNX5 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.66■□□□□ 0.58
Shisa8J3QNX5 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Shisa8J3QNX5 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Shisa8J3QNX5 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Shisa8J3QNX5 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.66■□□□□ 0.58
Shisa8J3QNX5 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Shisa8J3QNX5 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Shisa8J3QNX5 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Shisa8J3QNX5 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.65■□□□□ 0.58
Shisa8J3QNX5 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Shisa8J3QNX5 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Shisa8J3QNX5 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Shisa8J3QNX5 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Shisa8J3QNX5 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Shisa8J3QNX5 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Shisa8J3QNX5 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
Shisa8J3QNX5 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Shisa8J3QNX5 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Shisa8J3QNX5 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Shisa8J3QNX5 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Shisa8J3QNX5 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Shisa8J3QNX5 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Shisa8J3QNX5 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.64■□□□□ 0.58
Shisa8J3QNX5 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Shisa8J3QNX5 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Shisa8J3QNX5 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Shisa8J3QNX5 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC18.64■□□□□ 0.57
Shisa8J3QNX5 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC18.64■□□□□ 0.57
Shisa8J3QNX5 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Shisa8J3QNX5 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Shisa8J3QNX5 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Shisa8J3QNX5 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Shisa8J3QNX5 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Shisa8J3QNX5 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Shisa8J3QNX5 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 84 ms