Protein–RNA interactions for Protein: E9Q555

Rnf213, E3 ubiquitin-protein ligase RNF213, mousemouse

Known RBP Predictions only

Length 5,152 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf213E9Q555 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Rnf213E9Q555 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC10.25□□□□□ -0.77
Rnf213E9Q555 AC165080.2-201ENSMUST00000217491 1530 ntBASIC10.25□□□□□ -0.77
Rnf213E9Q555 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Rnf213E9Q555 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Rnf213E9Q555 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC10.25□□□□□ -0.77
Rnf213E9Q555 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC10.25□□□□□ -0.77
Rnf213E9Q555 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Rnf213E9Q555 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC10.24□□□□□ -0.77
Rnf213E9Q555 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC10.24□□□□□ -0.77
Rnf213E9Q555 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Rnf213E9Q555 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Rnf213E9Q555 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Rnf213E9Q555 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC10.24□□□□□ -0.77
Rnf213E9Q555 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC10.24□□□□□ -0.77
Rnf213E9Q555 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC10.24□□□□□ -0.77
Rnf213E9Q555 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC10.24□□□□□ -0.77
Rnf213E9Q555 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Rnf213E9Q555 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Rnf213E9Q555 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Rnf213E9Q555 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC10.24□□□□□ -0.77
Rnf213E9Q555 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Rnf213E9Q555 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Rnf213E9Q555 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Rnf213E9Q555 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Rnf213E9Q555 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC10.23□□□□□ -0.77
Rnf213E9Q555 Gm13181-201ENSMUST00000120117 1069 ntBASIC10.23□□□□□ -0.77
Rnf213E9Q555 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Rnf213E9Q555 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Rnf213E9Q555 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Rnf213E9Q555 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Rnf213E9Q555 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Rnf213E9Q555 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Rnf213E9Q555 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC10.22□□□□□ -0.77
Rnf213E9Q555 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Rnf213E9Q555 Gm4430-201ENSMUST00000192413 1943 ntBASIC10.22□□□□□ -0.77
Rnf213E9Q555 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Rnf213E9Q555 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC10.22□□□□□ -0.77
Rnf213E9Q555 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Rnf213E9Q555 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC10.22□□□□□ -0.77
Rnf213E9Q555 Gm13148-201ENSMUST00000118892 745 ntBASIC10.21□□□□□ -0.77
Rnf213E9Q555 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Rnf213E9Q555 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC10.21□□□□□ -0.77
Rnf213E9Q555 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Rnf213E9Q555 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC10.21□□□□□ -0.77
Rnf213E9Q555 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Rnf213E9Q555 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Rnf213E9Q555 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Rnf213E9Q555 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC10.21□□□□□ -0.78
Rnf213E9Q555 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC10.21□□□□□ -0.78
Rnf213E9Q555 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC10.21□□□□□ -0.78
Rnf213E9Q555 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Rnf213E9Q555 Gm8520-201ENSMUST00000186517 868 ntBASIC10.21□□□□□ -0.78
Rnf213E9Q555 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Rnf213E9Q555 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Rnf213E9Q555 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC10.21□□□□□ -0.78
Rnf213E9Q555 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC10.2□□□□□ -0.78
Rnf213E9Q555 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Rnf213E9Q555 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Rnf213E9Q555 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Rnf213E9Q555 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Rnf213E9Q555 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Rnf213E9Q555 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC10.2□□□□□ -0.78
Rnf213E9Q555 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Rnf213E9Q555 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Rnf213E9Q555 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Rnf213E9Q555 Gm13234-201ENSMUST00000120010 747 ntBASIC10.2□□□□□ -0.78
Rnf213E9Q555 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Rnf213E9Q555 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Rnf213E9Q555 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Rnf213E9Q555 Gm43530-201ENSMUST00000195920 274 ntBASIC10.2□□□□□ -0.78
Rnf213E9Q555 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC10.2□□□□□ -0.78
Rnf213E9Q555 AC166356.1-201ENSMUST00000228236 1426 ntBASIC10.2□□□□□ -0.78
Rnf213E9Q555 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Rnf213E9Q555 Gm29241-201ENSMUST00000189260 1096 ntBASIC10.2□□□□□ -0.78
Rnf213E9Q555 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Rnf213E9Q555 Gm13168-201ENSMUST00000121771 632 ntBASIC10.19□□□□□ -0.78
Rnf213E9Q555 Mir6982-201ENSMUST00000184354 68 ntBASIC10.19□□□□□ -0.78
Rnf213E9Q555 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC10.19□□□□□ -0.78
Rnf213E9Q555 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Rnf213E9Q555 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Rnf213E9Q555 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Rnf213E9Q555 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Rnf213E9Q555 Gm42778-201ENSMUST00000199644 553 ntBASIC10.19□□□□□ -0.78
Rnf213E9Q555 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Rnf213E9Q555 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Rnf213E9Q555 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Rnf213E9Q555 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Rnf213E9Q555 Gm14281-201ENSMUST00000121700 1294 ntBASIC10.19□□□□□ -0.78
Rnf213E9Q555 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC10.19□□□□□ -0.78
Rnf213E9Q555 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC10.19□□□□□ -0.78
Rnf213E9Q555 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Rnf213E9Q555 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Rnf213E9Q555 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Rnf213E9Q555 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Rnf213E9Q555 Gm6934-201ENSMUST00000194780 1905 ntBASIC10.18□□□□□ -0.78
Rnf213E9Q555 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Rnf213E9Q555 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Rnf213E9Q555 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Rnf213E9Q555 Gm20049-201ENSMUST00000219950 730 ntBASIC10.18□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms