Protein–RNA interactions for Protein: A0A0J9YTW6

Scn2a, Sodium channel protein, mousemouse

Predictions only

Length 2,006 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2aA0A0J9YTW6 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Scn2aA0A0J9YTW6 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Scn2aA0A0J9YTW6 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Scn2aA0A0J9YTW6 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Scn2aA0A0J9YTW6 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Scn2aA0A0J9YTW6 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Scn2aA0A0J9YTW6 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Scn2aA0A0J9YTW6 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Scn2aA0A0J9YTW6 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC18.9■□□□□ 0.62
Scn2aA0A0J9YTW6 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Scn2aA0A0J9YTW6 Gm43403-201ENSMUST00000198011 1786 ntBASIC18.9■□□□□ 0.62
Scn2aA0A0J9YTW6 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Scn2aA0A0J9YTW6 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Scn2aA0A0J9YTW6 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Scn2aA0A0J9YTW6 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC18.9■□□□□ 0.62
Scn2aA0A0J9YTW6 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC18.9■□□□□ 0.62
Scn2aA0A0J9YTW6 Gm13241-201ENSMUST00000094493 780 ntBASIC18.9■□□□□ 0.62
Scn2aA0A0J9YTW6 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
Scn2aA0A0J9YTW6 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Scn2aA0A0J9YTW6 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Scn2aA0A0J9YTW6 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC18.89■□□□□ 0.61
Scn2aA0A0J9YTW6 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC18.89■□□□□ 0.61
Scn2aA0A0J9YTW6 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Scn2aA0A0J9YTW6 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Scn2aA0A0J9YTW6 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Scn2aA0A0J9YTW6 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC18.88■□□□□ 0.61
Scn2aA0A0J9YTW6 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Scn2aA0A0J9YTW6 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scn2aA0A0J9YTW6 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Scn2aA0A0J9YTW6 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scn2aA0A0J9YTW6 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scn2aA0A0J9YTW6 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scn2aA0A0J9YTW6 Golgb1-201ENSMUST00000023534 498 ntBASIC18.88■□□□□ 0.61
Scn2aA0A0J9YTW6 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scn2aA0A0J9YTW6 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scn2aA0A0J9YTW6 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Scn2aA0A0J9YTW6 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Scn2aA0A0J9YTW6 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scn2aA0A0J9YTW6 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
Scn2aA0A0J9YTW6 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Scn2aA0A0J9YTW6 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scn2aA0A0J9YTW6 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scn2aA0A0J9YTW6 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Scn2aA0A0J9YTW6 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Scn2aA0A0J9YTW6 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Scn2aA0A0J9YTW6 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Scn2aA0A0J9YTW6 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Scn2aA0A0J9YTW6 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Scn2aA0A0J9YTW6 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Scn2aA0A0J9YTW6 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Scn2aA0A0J9YTW6 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.85■□□□□ 0.61
Scn2aA0A0J9YTW6 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC18.85■□□□□ 0.61
Scn2aA0A0J9YTW6 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Scn2aA0A0J9YTW6 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC18.85■□□□□ 0.61
Scn2aA0A0J9YTW6 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Scn2aA0A0J9YTW6 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Scn2aA0A0J9YTW6 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scn2aA0A0J9YTW6 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
Scn2aA0A0J9YTW6 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scn2aA0A0J9YTW6 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Scn2aA0A0J9YTW6 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scn2aA0A0J9YTW6 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scn2aA0A0J9YTW6 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
Scn2aA0A0J9YTW6 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scn2aA0A0J9YTW6 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scn2aA0A0J9YTW6 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Scn2aA0A0J9YTW6 Gm43034-201ENSMUST00000198678 1364 ntBASIC18.84■□□□□ 0.61
Scn2aA0A0J9YTW6 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scn2aA0A0J9YTW6 Gm10657-201ENSMUST00000193528 1031 ntBASIC18.84■□□□□ 0.61
Scn2aA0A0J9YTW6 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scn2aA0A0J9YTW6 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Scn2aA0A0J9YTW6 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scn2aA0A0J9YTW6 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scn2aA0A0J9YTW6 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
Scn2aA0A0J9YTW6 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Scn2aA0A0J9YTW6 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Scn2aA0A0J9YTW6 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Scn2aA0A0J9YTW6 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
Scn2aA0A0J9YTW6 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Scn2aA0A0J9YTW6 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
Scn2aA0A0J9YTW6 Gm7143-201ENSMUST00000222811 859 ntBASIC18.83■□□□□ 0.6
Scn2aA0A0J9YTW6 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Scn2aA0A0J9YTW6 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scn2aA0A0J9YTW6 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Scn2aA0A0J9YTW6 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Scn2aA0A0J9YTW6 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scn2aA0A0J9YTW6 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scn2aA0A0J9YTW6 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scn2aA0A0J9YTW6 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scn2aA0A0J9YTW6 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scn2aA0A0J9YTW6 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Scn2aA0A0J9YTW6 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC18.81■□□□□ 0.6
Scn2aA0A0J9YTW6 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scn2aA0A0J9YTW6 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scn2aA0A0J9YTW6 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scn2aA0A0J9YTW6 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scn2aA0A0J9YTW6 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scn2aA0A0J9YTW6 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scn2aA0A0J9YTW6 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scn2aA0A0J9YTW6 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms