Protein–RNA interactions for Protein: A0A0A6YXT2

Ighv1-36, Immunoglobulin heavy variable 1-36 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-36A0A0A6YXT2 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ighv1-36A0A0A6YXT2 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Ighv1-36A0A0A6YXT2 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ighv1-36A0A0A6YXT2 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ighv1-36A0A0A6YXT2 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ighv1-36A0A0A6YXT2 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC16.7■□□□□ 0.26
Ighv1-36A0A0A6YXT2 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ighv1-36A0A0A6YXT2 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Ighv1-36A0A0A6YXT2 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ighv1-36A0A0A6YXT2 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Ighv1-36A0A0A6YXT2 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ighv1-36A0A0A6YXT2 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ighv1-36A0A0A6YXT2 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ighv1-36A0A0A6YXT2 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ighv1-36A0A0A6YXT2 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ighv1-36A0A0A6YXT2 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Ighv1-36A0A0A6YXT2 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ighv1-36A0A0A6YXT2 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ighv1-36A0A0A6YXT2 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ighv1-36A0A0A6YXT2 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ighv1-36A0A0A6YXT2 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Ighv1-36A0A0A6YXT2 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC16.69■□□□□ 0.26
Ighv1-36A0A0A6YXT2 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ighv1-36A0A0A6YXT2 Gm45444-201ENSMUST00000211394 898 ntBASIC16.69■□□□□ 0.26
Ighv1-36A0A0A6YXT2 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC16.69■□□□□ 0.26
Ighv1-36A0A0A6YXT2 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ighv1-36A0A0A6YXT2 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ighv1-36A0A0A6YXT2 Cap2-205ENSMUST00000225824 1634 ntBASIC16.69■□□□□ 0.26
Ighv1-36A0A0A6YXT2 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ighv1-36A0A0A6YXT2 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ighv1-36A0A0A6YXT2 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ighv1-36A0A0A6YXT2 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ighv1-36A0A0A6YXT2 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Ighv1-36A0A0A6YXT2 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ighv1-36A0A0A6YXT2 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ighv1-36A0A0A6YXT2 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Ighv1-36A0A0A6YXT2 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC16.68■□□□□ 0.26
Ighv1-36A0A0A6YXT2 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Ighv1-36A0A0A6YXT2 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC16.68■□□□□ 0.26
Ighv1-36A0A0A6YXT2 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Ighv1-36A0A0A6YXT2 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC16.68■□□□□ 0.26
Ighv1-36A0A0A6YXT2 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ighv1-36A0A0A6YXT2 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ighv1-36A0A0A6YXT2 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Ighv1-36A0A0A6YXT2 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC16.68■□□□□ 0.26
Ighv1-36A0A0A6YXT2 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Ighv1-36A0A0A6YXT2 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ighv1-36A0A0A6YXT2 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ighv1-36A0A0A6YXT2 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ighv1-36A0A0A6YXT2 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Ighv1-36A0A0A6YXT2 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ighv1-36A0A0A6YXT2 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC16.67■□□□□ 0.26
Ighv1-36A0A0A6YXT2 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ighv1-36A0A0A6YXT2 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ighv1-36A0A0A6YXT2 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ighv1-36A0A0A6YXT2 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ighv1-36A0A0A6YXT2 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ighv1-36A0A0A6YXT2 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ighv1-36A0A0A6YXT2 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ighv1-36A0A0A6YXT2 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ighv1-36A0A0A6YXT2 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ighv1-36A0A0A6YXT2 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC16.66■□□□□ 0.26
Ighv1-36A0A0A6YXT2 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ighv1-36A0A0A6YXT2 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ighv1-36A0A0A6YXT2 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Ighv1-36A0A0A6YXT2 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ighv1-36A0A0A6YXT2 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ighv1-36A0A0A6YXT2 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ighv1-36A0A0A6YXT2 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ighv1-36A0A0A6YXT2 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Ighv1-36A0A0A6YXT2 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC16.65■□□□□ 0.26
Ighv1-36A0A0A6YXT2 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC16.65■□□□□ 0.26
Ighv1-36A0A0A6YXT2 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ighv1-36A0A0A6YXT2 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ighv1-36A0A0A6YXT2 AC152827.1-201ENSMUST00000221143 2189 ntBASIC16.65■□□□□ 0.26
Ighv1-36A0A0A6YXT2 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ighv1-36A0A0A6YXT2 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ighv1-36A0A0A6YXT2 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ighv1-36A0A0A6YXT2 Gm16464-201ENSMUST00000117815 1095 ntBASIC16.64■□□□□ 0.25
Ighv1-36A0A0A6YXT2 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ighv1-36A0A0A6YXT2 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ighv1-36A0A0A6YXT2 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Ighv1-36A0A0A6YXT2 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ighv1-36A0A0A6YXT2 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ighv1-36A0A0A6YXT2 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ighv1-36A0A0A6YXT2 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ighv1-36A0A0A6YXT2 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ighv1-36A0A0A6YXT2 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Ighv1-36A0A0A6YXT2 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ighv1-36A0A0A6YXT2 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
Ighv1-36A0A0A6YXT2 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ighv1-36A0A0A6YXT2 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ighv1-36A0A0A6YXT2 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ighv1-36A0A0A6YXT2 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Ighv1-36A0A0A6YXT2 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ighv1-36A0A0A6YXT2 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Ighv1-36A0A0A6YXT2 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ighv1-36A0A0A6YXT2 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ighv1-36A0A0A6YXT2 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ighv1-36A0A0A6YXT2 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms