Protein–RNA interactions for Protein: A0A0A6YXN8

Sirpb1b, Signal-regulatory protein beta 1B, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sirpb1bA0A0A6YXN8 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sirpb1bA0A0A6YXN8 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sirpb1bA0A0A6YXN8 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC18.05■□□□□ 0.48
Sirpb1bA0A0A6YXN8 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Sirpb1bA0A0A6YXN8 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sirpb1bA0A0A6YXN8 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sirpb1bA0A0A6YXN8 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sirpb1bA0A0A6YXN8 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sirpb1bA0A0A6YXN8 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sirpb1bA0A0A6YXN8 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sirpb1bA0A0A6YXN8 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sirpb1bA0A0A6YXN8 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sirpb1bA0A0A6YXN8 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sirpb1bA0A0A6YXN8 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Sirpb1bA0A0A6YXN8 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sirpb1bA0A0A6YXN8 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sirpb1bA0A0A6YXN8 Gm5131-201ENSMUST00000212776 1238 ntBASIC18.04■□□□□ 0.48
Sirpb1bA0A0A6YXN8 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sirpb1bA0A0A6YXN8 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sirpb1bA0A0A6YXN8 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sirpb1bA0A0A6YXN8 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Sirpb1bA0A0A6YXN8 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sirpb1bA0A0A6YXN8 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sirpb1bA0A0A6YXN8 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.03■□□□□ 0.48
Sirpb1bA0A0A6YXN8 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
Sirpb1bA0A0A6YXN8 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sirpb1bA0A0A6YXN8 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC18.03■□□□□ 0.48
Sirpb1bA0A0A6YXN8 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sirpb1bA0A0A6YXN8 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sirpb1bA0A0A6YXN8 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Sirpb1bA0A0A6YXN8 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Sirpb1bA0A0A6YXN8 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Sirpb1bA0A0A6YXN8 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sirpb1bA0A0A6YXN8 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sirpb1bA0A0A6YXN8 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Sirpb1bA0A0A6YXN8 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sirpb1bA0A0A6YXN8 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sirpb1bA0A0A6YXN8 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Sirpb1bA0A0A6YXN8 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Sirpb1bA0A0A6YXN8 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Sirpb1bA0A0A6YXN8 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Sirpb1bA0A0A6YXN8 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sirpb1bA0A0A6YXN8 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Sirpb1bA0A0A6YXN8 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Sirpb1bA0A0A6YXN8 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Sirpb1bA0A0A6YXN8 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Sirpb1bA0A0A6YXN8 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
Sirpb1bA0A0A6YXN8 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sirpb1bA0A0A6YXN8 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sirpb1bA0A0A6YXN8 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sirpb1bA0A0A6YXN8 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC18■□□□□ 0.47
Sirpb1bA0A0A6YXN8 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sirpb1bA0A0A6YXN8 Gm43403-201ENSMUST00000198011 1786 ntBASIC18■□□□□ 0.47
Sirpb1bA0A0A6YXN8 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sirpb1bA0A0A6YXN8 Gm16464-201ENSMUST00000117815 1095 ntBASIC18■□□□□ 0.47
Sirpb1bA0A0A6YXN8 Gm7417-201ENSMUST00000192950 473 ntBASIC18■□□□□ 0.47
Sirpb1bA0A0A6YXN8 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
Sirpb1bA0A0A6YXN8 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sirpb1bA0A0A6YXN8 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC18■□□□□ 0.47
Sirpb1bA0A0A6YXN8 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC18■□□□□ 0.47
Sirpb1bA0A0A6YXN8 AC117245.4-201ENSMUST00000217388 1646 ntBASIC18■□□□□ 0.47
Sirpb1bA0A0A6YXN8 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sirpb1bA0A0A6YXN8 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sirpb1bA0A0A6YXN8 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC17.99■□□□□ 0.47
Sirpb1bA0A0A6YXN8 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
Sirpb1bA0A0A6YXN8 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sirpb1bA0A0A6YXN8 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sirpb1bA0A0A6YXN8 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Sirpb1bA0A0A6YXN8 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sirpb1bA0A0A6YXN8 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sirpb1bA0A0A6YXN8 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC17.98■□□□□ 0.47
Sirpb1bA0A0A6YXN8 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Sirpb1bA0A0A6YXN8 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sirpb1bA0A0A6YXN8 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC17.98■□□□□ 0.47
Sirpb1bA0A0A6YXN8 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC17.98■□□□□ 0.47
Sirpb1bA0A0A6YXN8 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sirpb1bA0A0A6YXN8 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Sirpb1bA0A0A6YXN8 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sirpb1bA0A0A6YXN8 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sirpb1bA0A0A6YXN8 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sirpb1bA0A0A6YXN8 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Sirpb1bA0A0A6YXN8 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC17.97■□□□□ 0.47
Sirpb1bA0A0A6YXN8 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Sirpb1bA0A0A6YXN8 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Sirpb1bA0A0A6YXN8 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC17.97■□□□□ 0.47
Sirpb1bA0A0A6YXN8 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sirpb1bA0A0A6YXN8 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sirpb1bA0A0A6YXN8 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Sirpb1bA0A0A6YXN8 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Sirpb1bA0A0A6YXN8 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sirpb1bA0A0A6YXN8 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sirpb1bA0A0A6YXN8 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Sirpb1bA0A0A6YXN8 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sirpb1bA0A0A6YXN8 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sirpb1bA0A0A6YXN8 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Sirpb1bA0A0A6YXN8 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC17.96■□□□□ 0.47
Sirpb1bA0A0A6YXN8 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sirpb1bA0A0A6YXN8 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sirpb1bA0A0A6YXN8 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sirpb1bA0A0A6YXN8 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms