Protein–RNA interactions for Protein: A0A0A6YXG2

Ighv1-56, Immunoglobulin heavy variable 1-56 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-56A0A0A6YXG2 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Ighv1-56A0A0A6YXG2 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Ighv1-56A0A0A6YXG2 Gm10420-201ENSMUST00000121713 882 ntBASIC13.77□□□□□ -0.21
Ighv1-56A0A0A6YXG2 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Ighv1-56A0A0A6YXG2 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC13.77□□□□□ -0.21
Ighv1-56A0A0A6YXG2 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Ighv1-56A0A0A6YXG2 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ighv1-56A0A0A6YXG2 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Ighv1-56A0A0A6YXG2 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ighv1-56A0A0A6YXG2 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ighv1-56A0A0A6YXG2 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ighv1-56A0A0A6YXG2 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC13.77□□□□□ -0.21
Ighv1-56A0A0A6YXG2 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ighv1-56A0A0A6YXG2 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ighv1-56A0A0A6YXG2 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Ighv1-56A0A0A6YXG2 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC13.76□□□□□ -0.21
Ighv1-56A0A0A6YXG2 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Ighv1-56A0A0A6YXG2 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC13.76□□□□□ -0.21
Ighv1-56A0A0A6YXG2 Gm12366-201ENSMUST00000121722 873 ntBASIC13.76□□□□□ -0.21
Ighv1-56A0A0A6YXG2 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC13.76□□□□□ -0.21
Ighv1-56A0A0A6YXG2 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC13.76□□□□□ -0.21
Ighv1-56A0A0A6YXG2 Gm5786-201ENSMUST00000085368 882 ntBASIC13.76□□□□□ -0.21
Ighv1-56A0A0A6YXG2 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ighv1-56A0A0A6YXG2 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ighv1-56A0A0A6YXG2 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ighv1-56A0A0A6YXG2 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ighv1-56A0A0A6YXG2 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Ighv1-56A0A0A6YXG2 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ighv1-56A0A0A6YXG2 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ighv1-56A0A0A6YXG2 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ighv1-56A0A0A6YXG2 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ighv1-56A0A0A6YXG2 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ighv1-56A0A0A6YXG2 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC13.75□□□□□ -0.21
Ighv1-56A0A0A6YXG2 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Ighv1-56A0A0A6YXG2 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Ighv1-56A0A0A6YXG2 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ighv1-56A0A0A6YXG2 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ighv1-56A0A0A6YXG2 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ighv1-56A0A0A6YXG2 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Ighv1-56A0A0A6YXG2 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Ighv1-56A0A0A6YXG2 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Ighv1-56A0A0A6YXG2 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Ighv1-56A0A0A6YXG2 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ighv1-56A0A0A6YXG2 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Ighv1-56A0A0A6YXG2 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ighv1-56A0A0A6YXG2 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC13.74□□□□□ -0.21
Ighv1-56A0A0A6YXG2 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ighv1-56A0A0A6YXG2 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Ighv1-56A0A0A6YXG2 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC13.74□□□□□ -0.21
Ighv1-56A0A0A6YXG2 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ighv1-56A0A0A6YXG2 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ighv1-56A0A0A6YXG2 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ighv1-56A0A0A6YXG2 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ighv1-56A0A0A6YXG2 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ighv1-56A0A0A6YXG2 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ighv1-56A0A0A6YXG2 Gm11847-201ENSMUST00000125165 1119 ntBASIC13.73□□□□□ -0.21
Ighv1-56A0A0A6YXG2 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ighv1-56A0A0A6YXG2 Mir6538-201ENSMUST00000183713 110 ntBASIC13.73□□□□□ -0.21
Ighv1-56A0A0A6YXG2 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Ighv1-56A0A0A6YXG2 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC13.73□□□□□ -0.21
Ighv1-56A0A0A6YXG2 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ighv1-56A0A0A6YXG2 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ighv1-56A0A0A6YXG2 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ighv1-56A0A0A6YXG2 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ighv1-56A0A0A6YXG2 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ighv1-56A0A0A6YXG2 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ighv1-56A0A0A6YXG2 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ighv1-56A0A0A6YXG2 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ighv1-56A0A0A6YXG2 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ighv1-56A0A0A6YXG2 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ighv1-56A0A0A6YXG2 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ighv1-56A0A0A6YXG2 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ighv1-56A0A0A6YXG2 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Ighv1-56A0A0A6YXG2 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Ighv1-56A0A0A6YXG2 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ighv1-56A0A0A6YXG2 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Ighv1-56A0A0A6YXG2 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ighv1-56A0A0A6YXG2 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ighv1-56A0A0A6YXG2 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ighv1-56A0A0A6YXG2 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ighv1-56A0A0A6YXG2 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ighv1-56A0A0A6YXG2 Snhg20-203ENSMUST00000182811 2153 ntBASIC13.71□□□□□ -0.22
Ighv1-56A0A0A6YXG2 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC13.7□□□□□ -0.22
Ighv1-56A0A0A6YXG2 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ighv1-56A0A0A6YXG2 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ighv1-56A0A0A6YXG2 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ighv1-56A0A0A6YXG2 Gm28536-201ENSMUST00000190971 1317 ntBASIC13.7□□□□□ -0.22
Ighv1-56A0A0A6YXG2 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ighv1-56A0A0A6YXG2 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ighv1-56A0A0A6YXG2 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ighv1-56A0A0A6YXG2 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ighv1-56A0A0A6YXG2 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ighv1-56A0A0A6YXG2 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC13.7□□□□□ -0.22
Ighv1-56A0A0A6YXG2 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Ighv1-56A0A0A6YXG2 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ighv1-56A0A0A6YXG2 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ighv1-56A0A0A6YXG2 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC13.7□□□□□ -0.22
Ighv1-56A0A0A6YXG2 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC13.7□□□□□ -0.22
Ighv1-56A0A0A6YXG2 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC13.7□□□□□ -0.22
Ighv1-56A0A0A6YXG2 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 75.2 ms