Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC15.78■□□□□ 0.12
Trav6d-7A0A075B6B0 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav6d-7A0A075B6B0 Gm10232-201ENSMUST00000089221 720 ntBASIC15.78■□□□□ 0.12
Trav6d-7A0A075B6B0 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav6d-7A0A075B6B0 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
Trav6d-7A0A075B6B0 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav6d-7A0A075B6B0 Gm4430-201ENSMUST00000192413 1943 ntBASIC15.78■□□□□ 0.12
Trav6d-7A0A075B6B0 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trav6d-7A0A075B6B0 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav6d-7A0A075B6B0 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav6d-7A0A075B6B0 AC164883.3-201ENSMUST00000227396 1774 ntBASIC15.77■□□□□ 0.12
Trav6d-7A0A075B6B0 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav6d-7A0A075B6B0 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Trav6d-7A0A075B6B0 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav6d-7A0A075B6B0 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
Trav6d-7A0A075B6B0 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC15.77■□□□□ 0.12
Trav6d-7A0A075B6B0 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trav6d-7A0A075B6B0 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav6d-7A0A075B6B0 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav6d-7A0A075B6B0 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav6d-7A0A075B6B0 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav6d-7A0A075B6B0 Gm34220-201ENSMUST00000223001 2709 ntBASIC15.77■□□□□ 0.11
Trav6d-7A0A075B6B0 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav6d-7A0A075B6B0 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav6d-7A0A075B6B0 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav6d-7A0A075B6B0 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trav6d-7A0A075B6B0 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav6d-7A0A075B6B0 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav6d-7A0A075B6B0 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav6d-7A0A075B6B0 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Trav6d-7A0A075B6B0 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC15.76■□□□□ 0.11
Trav6d-7A0A075B6B0 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav6d-7A0A075B6B0 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav6d-7A0A075B6B0 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav6d-7A0A075B6B0 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC15.76■□□□□ 0.11
Trav6d-7A0A075B6B0 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Trav6d-7A0A075B6B0 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav6d-7A0A075B6B0 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
Trav6d-7A0A075B6B0 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav6d-7A0A075B6B0 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav6d-7A0A075B6B0 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Trav6d-7A0A075B6B0 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav6d-7A0A075B6B0 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Trav6d-7A0A075B6B0 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav6d-7A0A075B6B0 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trav6d-7A0A075B6B0 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav6d-7A0A075B6B0 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav6d-7A0A075B6B0 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav6d-7A0A075B6B0 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav6d-7A0A075B6B0 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav6d-7A0A075B6B0 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav6d-7A0A075B6B0 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
Trav6d-7A0A075B6B0 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trav6d-7A0A075B6B0 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav6d-7A0A075B6B0 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trav6d-7A0A075B6B0 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC15.74■□□□□ 0.11
Trav6d-7A0A075B6B0 Gm10616-201ENSMUST00000205285 2127 ntBASIC15.74■□□□□ 0.11
Trav6d-7A0A075B6B0 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav6d-7A0A075B6B0 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav6d-7A0A075B6B0 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Trav6d-7A0A075B6B0 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav6d-7A0A075B6B0 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Trav6d-7A0A075B6B0 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav6d-7A0A075B6B0 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Trav6d-7A0A075B6B0 Gm44949-201ENSMUST00000206423 1450 ntBASIC15.73■□□□□ 0.11
Trav6d-7A0A075B6B0 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Trav6d-7A0A075B6B0 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trav6d-7A0A075B6B0 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC15.73■□□□□ 0.11
Trav6d-7A0A075B6B0 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC15.73■□□□□ 0.11
Trav6d-7A0A075B6B0 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Trav6d-7A0A075B6B0 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trav6d-7A0A075B6B0 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav6d-7A0A075B6B0 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav6d-7A0A075B6B0 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
Trav6d-7A0A075B6B0 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trav6d-7A0A075B6B0 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav6d-7A0A075B6B0 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Trav6d-7A0A075B6B0 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trav6d-7A0A075B6B0 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav6d-7A0A075B6B0 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trav6d-7A0A075B6B0 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC15.72■□□□□ 0.11
Trav6d-7A0A075B6B0 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav6d-7A0A075B6B0 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav6d-7A0A075B6B0 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav6d-7A0A075B6B0 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav6d-7A0A075B6B0 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav6d-7A0A075B6B0 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav6d-7A0A075B6B0 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav6d-7A0A075B6B0 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav6d-7A0A075B6B0 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav6d-7A0A075B6B0 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav6d-7A0A075B6B0 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav6d-7A0A075B6B0 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC15.71■□□□□ 0.11
Trav6d-7A0A075B6B0 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav6d-7A0A075B6B0 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav6d-7A0A075B6B0 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Trav6d-7A0A075B6B0 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav6d-7A0A075B6B0 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Trav6d-7A0A075B6B0 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trav6d-7A0A075B6B0 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC15.71■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms