Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trav8n-2A0A075B633 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.93■□□□□ 0.62
Trav8n-2A0A075B633 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Trav8n-2A0A075B633 Gm29257-201ENSMUST00000186115 639 ntBASIC18.93■□□□□ 0.62
Trav8n-2A0A075B633 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trav8n-2A0A075B633 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trav8n-2A0A075B633 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trav8n-2A0A075B633 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trav8n-2A0A075B633 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trav8n-2A0A075B633 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Trav8n-2A0A075B633 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Trav8n-2A0A075B633 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trav8n-2A0A075B633 AC115037.1-201ENSMUST00000223391 2173 ntBASIC18.92■□□□□ 0.62
Trav8n-2A0A075B633 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trav8n-2A0A075B633 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC18.92■□□□□ 0.62
Trav8n-2A0A075B633 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trav8n-2A0A075B633 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Trav8n-2A0A075B633 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Trav8n-2A0A075B633 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trav8n-2A0A075B633 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trav8n-2A0A075B633 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Trav8n-2A0A075B633 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Trav8n-2A0A075B633 Gm10493-201ENSMUST00000097270 612 ntBASIC18.91■□□□□ 0.62
Trav8n-2A0A075B633 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Trav8n-2A0A075B633 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trav8n-2A0A075B633 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trav8n-2A0A075B633 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trav8n-2A0A075B633 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
Trav8n-2A0A075B633 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Trav8n-2A0A075B633 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Trav8n-2A0A075B633 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Trav8n-2A0A075B633 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trav8n-2A0A075B633 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC18.9■□□□□ 0.62
Trav8n-2A0A075B633 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trav8n-2A0A075B633 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trav8n-2A0A075B633 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trav8n-2A0A075B633 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trav8n-2A0A075B633 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Trav8n-2A0A075B633 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trav8n-2A0A075B633 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Trav8n-2A0A075B633 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trav8n-2A0A075B633 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trav8n-2A0A075B633 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Trav8n-2A0A075B633 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC18.88■□□□□ 0.61
Trav8n-2A0A075B633 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trav8n-2A0A075B633 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav8n-2A0A075B633 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav8n-2A0A075B633 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC18.88■□□□□ 0.61
Trav8n-2A0A075B633 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trav8n-2A0A075B633 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav8n-2A0A075B633 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Trav8n-2A0A075B633 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav8n-2A0A075B633 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav8n-2A0A075B633 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav8n-2A0A075B633 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Trav8n-2A0A075B633 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC18.87■□□□□ 0.61
Trav8n-2A0A075B633 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.87■□□□□ 0.61
Trav8n-2A0A075B633 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Trav8n-2A0A075B633 Gm7291-201ENSMUST00000199147 382 ntBASIC18.87■□□□□ 0.61
Trav8n-2A0A075B633 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC18.87■□□□□ 0.61
Trav8n-2A0A075B633 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Trav8n-2A0A075B633 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
Trav8n-2A0A075B633 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Trav8n-2A0A075B633 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC18.86■□□□□ 0.61
Trav8n-2A0A075B633 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trav8n-2A0A075B633 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.86■□□□□ 0.61
Trav8n-2A0A075B633 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trav8n-2A0A075B633 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC18.85■□□□□ 0.61
Trav8n-2A0A075B633 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav8n-2A0A075B633 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC18.85■□□□□ 0.61
Trav8n-2A0A075B633 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav8n-2A0A075B633 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav8n-2A0A075B633 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trav8n-2A0A075B633 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trav8n-2A0A075B633 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav8n-2A0A075B633 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.85■□□□□ 0.61
Trav8n-2A0A075B633 Gm42569-201ENSMUST00000200539 472 ntBASIC18.85■□□□□ 0.61
Trav8n-2A0A075B633 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC18.85■□□□□ 0.61
Trav8n-2A0A075B633 Spcs1-207ENSMUST00000228767 1008 ntBASIC18.85■□□□□ 0.61
Trav8n-2A0A075B633 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
Trav8n-2A0A075B633 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav8n-2A0A075B633 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav8n-2A0A075B633 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav8n-2A0A075B633 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav8n-2A0A075B633 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav8n-2A0A075B633 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.84■□□□□ 0.61
Trav8n-2A0A075B633 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trav8n-2A0A075B633 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav8n-2A0A075B633 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav8n-2A0A075B633 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trav8n-2A0A075B633 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trav8n-2A0A075B633 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trav8n-2A0A075B633 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.83■□□□□ 0.61
Trav8n-2A0A075B633 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trav8n-2A0A075B633 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC18.83■□□□□ 0.6
Trav8n-2A0A075B633 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.83■□□□□ 0.6
Trav8n-2A0A075B633 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trav8n-2A0A075B633 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trav8n-2A0A075B633 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Trav8n-2A0A075B633 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms