Protein–RNA interactions for Protein: A0A075B621

Trav6n-5, T cell receptor alpha variable 6N-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-5A0A075B621 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav6n-5A0A075B621 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC15.93■□□□□ 0.14
Trav6n-5A0A075B621 AC116713.1-201ENSMUST00000215074 430 ntBASIC15.93■□□□□ 0.14
Trav6n-5A0A075B621 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav6n-5A0A075B621 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Trav6n-5A0A075B621 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Trav6n-5A0A075B621 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Trav6n-5A0A075B621 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav6n-5A0A075B621 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav6n-5A0A075B621 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav6n-5A0A075B621 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav6n-5A0A075B621 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav6n-5A0A075B621 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
Trav6n-5A0A075B621 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav6n-5A0A075B621 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
Trav6n-5A0A075B621 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav6n-5A0A075B621 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trav6n-5A0A075B621 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav6n-5A0A075B621 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trav6n-5A0A075B621 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trav6n-5A0A075B621 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav6n-5A0A075B621 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav6n-5A0A075B621 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav6n-5A0A075B621 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav6n-5A0A075B621 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav6n-5A0A075B621 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trav6n-5A0A075B621 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav6n-5A0A075B621 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav6n-5A0A075B621 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav6n-5A0A075B621 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav6n-5A0A075B621 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav6n-5A0A075B621 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav6n-5A0A075B621 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC15.91■□□□□ 0.14
Trav6n-5A0A075B621 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav6n-5A0A075B621 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trav6n-5A0A075B621 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav6n-5A0A075B621 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav6n-5A0A075B621 AC122428.2-201ENSMUST00000216321 1832 ntBASIC15.9■□□□□ 0.14
Trav6n-5A0A075B621 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC15.9■□□□□ 0.14
Trav6n-5A0A075B621 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav6n-5A0A075B621 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav6n-5A0A075B621 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
Trav6n-5A0A075B621 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav6n-5A0A075B621 Gm8093-201ENSMUST00000128935 1892 ntBASIC15.9■□□□□ 0.14
Trav6n-5A0A075B621 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
Trav6n-5A0A075B621 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav6n-5A0A075B621 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC15.9■□□□□ 0.14
Trav6n-5A0A075B621 Gm5112-201ENSMUST00000204407 2368 ntBASIC15.9■□□□□ 0.14
Trav6n-5A0A075B621 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
Trav6n-5A0A075B621 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav6n-5A0A075B621 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trav6n-5A0A075B621 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trav6n-5A0A075B621 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav6n-5A0A075B621 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trav6n-5A0A075B621 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC15.89■□□□□ 0.13
Trav6n-5A0A075B621 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav6n-5A0A075B621 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav6n-5A0A075B621 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
Trav6n-5A0A075B621 Gm6821-201ENSMUST00000107540 542 ntBASIC15.89■□□□□ 0.13
Trav6n-5A0A075B621 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav6n-5A0A075B621 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC15.89■□□□□ 0.13
Trav6n-5A0A075B621 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav6n-5A0A075B621 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav6n-5A0A075B621 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav6n-5A0A075B621 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trav6n-5A0A075B621 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC15.88■□□□□ 0.13
Trav6n-5A0A075B621 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav6n-5A0A075B621 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Trav6n-5A0A075B621 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Trav6n-5A0A075B621 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav6n-5A0A075B621 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav6n-5A0A075B621 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC15.88■□□□□ 0.13
Trav6n-5A0A075B621 Gm9939-201ENSMUST00000067161 1154 ntBASIC15.88■□□□□ 0.13
Trav6n-5A0A075B621 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav6n-5A0A075B621 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav6n-5A0A075B621 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Trav6n-5A0A075B621 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav6n-5A0A075B621 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav6n-5A0A075B621 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav6n-5A0A075B621 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trav6n-5A0A075B621 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav6n-5A0A075B621 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trav6n-5A0A075B621 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Trav6n-5A0A075B621 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav6n-5A0A075B621 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trav6n-5A0A075B621 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav6n-5A0A075B621 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
Trav6n-5A0A075B621 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav6n-5A0A075B621 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
Trav6n-5A0A075B621 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav6n-5A0A075B621 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav6n-5A0A075B621 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC15.86■□□□□ 0.13
Trav6n-5A0A075B621 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Trav6n-5A0A075B621 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC15.86■□□□□ 0.13
Trav6n-5A0A075B621 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trav6n-5A0A075B621 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav6n-5A0A075B621 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav6n-5A0A075B621 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav6n-5A0A075B621 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Trav6n-5A0A075B621 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms