Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav5-1A0A075B5Z7 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trav5-1A0A075B5Z7 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC17.7■□□□□ 0.42
Trav5-1A0A075B5Z7 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav5-1A0A075B5Z7 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Trav5-1A0A075B5Z7 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav5-1A0A075B5Z7 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav5-1A0A075B5Z7 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav5-1A0A075B5Z7 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav5-1A0A075B5Z7 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Trav5-1A0A075B5Z7 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC17.7■□□□□ 0.42
Trav5-1A0A075B5Z7 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav5-1A0A075B5Z7 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav5-1A0A075B5Z7 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav5-1A0A075B5Z7 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trav5-1A0A075B5Z7 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC17.7■□□□□ 0.42
Trav5-1A0A075B5Z7 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav5-1A0A075B5Z7 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC17.69■□□□□ 0.42
Trav5-1A0A075B5Z7 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav5-1A0A075B5Z7 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trav5-1A0A075B5Z7 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC17.69■□□□□ 0.42
Trav5-1A0A075B5Z7 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC17.69■□□□□ 0.42
Trav5-1A0A075B5Z7 AC140930.3-201ENSMUST00000222935 274 ntBASIC17.69■□□□□ 0.42
Trav5-1A0A075B5Z7 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Trav5-1A0A075B5Z7 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC17.68■□□□□ 0.42
Trav5-1A0A075B5Z7 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav5-1A0A075B5Z7 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav5-1A0A075B5Z7 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC17.68■□□□□ 0.42
Trav5-1A0A075B5Z7 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trav5-1A0A075B5Z7 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav5-1A0A075B5Z7 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav5-1A0A075B5Z7 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav5-1A0A075B5Z7 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav5-1A0A075B5Z7 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav5-1A0A075B5Z7 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Trav5-1A0A075B5Z7 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav5-1A0A075B5Z7 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav5-1A0A075B5Z7 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav5-1A0A075B5Z7 Gm12821-201ENSMUST00000120022 600 ntBASIC17.67■□□□□ 0.42
Trav5-1A0A075B5Z7 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trav5-1A0A075B5Z7 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC17.67■□□□□ 0.42
Trav5-1A0A075B5Z7 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC17.67■□□□□ 0.42
Trav5-1A0A075B5Z7 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav5-1A0A075B5Z7 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav5-1A0A075B5Z7 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav5-1A0A075B5Z7 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trav5-1A0A075B5Z7 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav5-1A0A075B5Z7 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
Trav5-1A0A075B5Z7 Gm21956-201ENSMUST00000179946 522 ntBASIC17.66■□□□□ 0.42
Trav5-1A0A075B5Z7 Gm43759-201ENSMUST00000196925 1261 ntBASIC17.66■□□□□ 0.42
Trav5-1A0A075B5Z7 Gm9207-201ENSMUST00000198773 1115 ntBASIC17.66■□□□□ 0.42
Trav5-1A0A075B5Z7 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav5-1A0A075B5Z7 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Trav5-1A0A075B5Z7 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav5-1A0A075B5Z7 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trav5-1A0A075B5Z7 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trav5-1A0A075B5Z7 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trav5-1A0A075B5Z7 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Trav5-1A0A075B5Z7 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav5-1A0A075B5Z7 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Trav5-1A0A075B5Z7 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC17.64■□□□□ 0.41
Trav5-1A0A075B5Z7 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav5-1A0A075B5Z7 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav5-1A0A075B5Z7 Appbp2os-202ENSMUST00000206972 447 ntBASIC17.64■□□□□ 0.41
Trav5-1A0A075B5Z7 Krt8-ps-201ENSMUST00000208495 945 ntBASIC17.64■□□□□ 0.41
Trav5-1A0A075B5Z7 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav5-1A0A075B5Z7 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Trav5-1A0A075B5Z7 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav5-1A0A075B5Z7 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav5-1A0A075B5Z7 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trav5-1A0A075B5Z7 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC17.63■□□□□ 0.41
Trav5-1A0A075B5Z7 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav5-1A0A075B5Z7 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Trav5-1A0A075B5Z7 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav5-1A0A075B5Z7 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
Trav5-1A0A075B5Z7 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Trav5-1A0A075B5Z7 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
Trav5-1A0A075B5Z7 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC17.63■□□□□ 0.41
Trav5-1A0A075B5Z7 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trav5-1A0A075B5Z7 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Trav5-1A0A075B5Z7 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trav5-1A0A075B5Z7 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav5-1A0A075B5Z7 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav5-1A0A075B5Z7 Gm43530-201ENSMUST00000195920 274 ntBASIC17.62■□□□□ 0.41
Trav5-1A0A075B5Z7 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav5-1A0A075B5Z7 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trav5-1A0A075B5Z7 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
Trav5-1A0A075B5Z7 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav5-1A0A075B5Z7 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav5-1A0A075B5Z7 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav5-1A0A075B5Z7 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav5-1A0A075B5Z7 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav5-1A0A075B5Z7 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav5-1A0A075B5Z7 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav5-1A0A075B5Z7 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav5-1A0A075B5Z7 Gm8770-201ENSMUST00000121113 1109 ntBASIC17.61■□□□□ 0.41
Trav5-1A0A075B5Z7 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trav5-1A0A075B5Z7 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trav5-1A0A075B5Z7 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav5-1A0A075B5Z7 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms