Protein–RNA interactions for Protein: Q9Z0S4

Cldn13, Claudin-13, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn13Q9Z0S4 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Cldn13Q9Z0S4 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
Cldn13Q9Z0S4 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Cldn13Q9Z0S4 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cldn13Q9Z0S4 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cldn13Q9Z0S4 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cldn13Q9Z0S4 Gm14117-201ENSMUST00000122417 843 ntBASIC18.39■□□□□ 0.53
Cldn13Q9Z0S4 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC18.39■□□□□ 0.53
Cldn13Q9Z0S4 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cldn13Q9Z0S4 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cldn13Q9Z0S4 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cldn13Q9Z0S4 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cldn13Q9Z0S4 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cldn13Q9Z0S4 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC18.38■□□□□ 0.53
Cldn13Q9Z0S4 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC18.38■□□□□ 0.53
Cldn13Q9Z0S4 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cldn13Q9Z0S4 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC18.38■□□□□ 0.53
Cldn13Q9Z0S4 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cldn13Q9Z0S4 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cldn13Q9Z0S4 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Cldn13Q9Z0S4 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cldn13Q9Z0S4 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cldn13Q9Z0S4 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cldn13Q9Z0S4 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cldn13Q9Z0S4 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cldn13Q9Z0S4 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.36■□□□□ 0.53
Cldn13Q9Z0S4 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC18.36■□□□□ 0.53
Cldn13Q9Z0S4 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC18.36■□□□□ 0.53
Cldn13Q9Z0S4 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cldn13Q9Z0S4 Gm5131-201ENSMUST00000212776 1238 ntBASIC18.36■□□□□ 0.53
Cldn13Q9Z0S4 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cldn13Q9Z0S4 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Cldn13Q9Z0S4 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
Cldn13Q9Z0S4 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cldn13Q9Z0S4 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cldn13Q9Z0S4 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cldn13Q9Z0S4 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC18.35■□□□□ 0.53
Cldn13Q9Z0S4 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cldn13Q9Z0S4 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.35■□□□□ 0.53
Cldn13Q9Z0S4 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC18.35■□□□□ 0.53
Cldn13Q9Z0S4 Notumos-201ENSMUST00000151998 2659 ntBASIC18.35■□□□□ 0.53
Cldn13Q9Z0S4 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cldn13Q9Z0S4 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cldn13Q9Z0S4 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cldn13Q9Z0S4 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cldn13Q9Z0S4 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cldn13Q9Z0S4 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cldn13Q9Z0S4 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cldn13Q9Z0S4 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cldn13Q9Z0S4 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Cldn13Q9Z0S4 Etf1-202ENSMUST00000180351 108 ntBASIC18.34■□□□□ 0.53
Cldn13Q9Z0S4 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cldn13Q9Z0S4 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cldn13Q9Z0S4 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cldn13Q9Z0S4 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cldn13Q9Z0S4 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cldn13Q9Z0S4 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Cldn13Q9Z0S4 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cldn13Q9Z0S4 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC18.33■□□□□ 0.53
Cldn13Q9Z0S4 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.33■□□□□ 0.52
Cldn13Q9Z0S4 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC18.33■□□□□ 0.52
Cldn13Q9Z0S4 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC18.33■□□□□ 0.52
Cldn13Q9Z0S4 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cldn13Q9Z0S4 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC18.33■□□□□ 0.52
Cldn13Q9Z0S4 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Cldn13Q9Z0S4 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cldn13Q9Z0S4 Gm44949-201ENSMUST00000206423 1450 ntBASIC18.33■□□□□ 0.52
Cldn13Q9Z0S4 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cldn13Q9Z0S4 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cldn13Q9Z0S4 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.32■□□□□ 0.52
Cldn13Q9Z0S4 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
Cldn13Q9Z0S4 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cldn13Q9Z0S4 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cldn13Q9Z0S4 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Cldn13Q9Z0S4 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cldn13Q9Z0S4 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Cldn13Q9Z0S4 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cldn13Q9Z0S4 AC158990.1-201ENSMUST00000221450 2016 ntBASIC18.31■□□□□ 0.52
Cldn13Q9Z0S4 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Cldn13Q9Z0S4 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cldn13Q9Z0S4 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Cldn13Q9Z0S4 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC18.3■□□□□ 0.52
Cldn13Q9Z0S4 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC18.3■□□□□ 0.52
Cldn13Q9Z0S4 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Cldn13Q9Z0S4 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Cldn13Q9Z0S4 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cldn13Q9Z0S4 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cldn13Q9Z0S4 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.29■□□□□ 0.52
Cldn13Q9Z0S4 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cldn13Q9Z0S4 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Cldn13Q9Z0S4 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
Cldn13Q9Z0S4 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC18.29■□□□□ 0.52
Cldn13Q9Z0S4 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.29■□□□□ 0.52
Cldn13Q9Z0S4 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cldn13Q9Z0S4 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cldn13Q9Z0S4 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cldn13Q9Z0S4 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC18.28■□□□□ 0.52
Cldn13Q9Z0S4 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cldn13Q9Z0S4 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cldn13Q9Z0S4 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms