Protein–RNA interactions for Protein: Q9R1R0

Lhx6, LIM/homeobox protein Lhx6, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx6Q9R1R0 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lhx6Q9R1R0 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC19.25■□□□□ 0.67
Lhx6Q9R1R0 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.25■□□□□ 0.67
Lhx6Q9R1R0 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Lhx6Q9R1R0 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC19.25■□□□□ 0.67
Lhx6Q9R1R0 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lhx6Q9R1R0 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Lhx6Q9R1R0 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lhx6Q9R1R0 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lhx6Q9R1R0 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lhx6Q9R1R0 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lhx6Q9R1R0 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lhx6Q9R1R0 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC19.24■□□□□ 0.67
Lhx6Q9R1R0 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lhx6Q9R1R0 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC19.24■□□□□ 0.67
Lhx6Q9R1R0 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lhx6Q9R1R0 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Lhx6Q9R1R0 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Lhx6Q9R1R0 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
Lhx6Q9R1R0 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lhx6Q9R1R0 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lhx6Q9R1R0 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lhx6Q9R1R0 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lhx6Q9R1R0 Gm8493-201ENSMUST00000196881 489 ntBASIC19.23■□□□□ 0.67
Lhx6Q9R1R0 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lhx6Q9R1R0 AC117245.4-201ENSMUST00000217388 1646 ntBASIC19.22■□□□□ 0.67
Lhx6Q9R1R0 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lhx6Q9R1R0 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lhx6Q9R1R0 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lhx6Q9R1R0 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.22■□□□□ 0.67
Lhx6Q9R1R0 Nsd1-206ENSMUST00000224918 1001 ntBASIC19.22■□□□□ 0.67
Lhx6Q9R1R0 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lhx6Q9R1R0 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lhx6Q9R1R0 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lhx6Q9R1R0 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lhx6Q9R1R0 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lhx6Q9R1R0 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lhx6Q9R1R0 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.21■□□□□ 0.67
Lhx6Q9R1R0 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.21■□□□□ 0.67
Lhx6Q9R1R0 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.21■□□□□ 0.67
Lhx6Q9R1R0 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lhx6Q9R1R0 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
Lhx6Q9R1R0 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC19.21■□□□□ 0.67
Lhx6Q9R1R0 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Lhx6Q9R1R0 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lhx6Q9R1R0 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.2■□□□□ 0.66
Lhx6Q9R1R0 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lhx6Q9R1R0 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lhx6Q9R1R0 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lhx6Q9R1R0 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.19■□□□□ 0.66
Lhx6Q9R1R0 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.19■□□□□ 0.66
Lhx6Q9R1R0 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lhx6Q9R1R0 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lhx6Q9R1R0 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Lhx6Q9R1R0 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lhx6Q9R1R0 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
Lhx6Q9R1R0 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lhx6Q9R1R0 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lhx6Q9R1R0 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lhx6Q9R1R0 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lhx6Q9R1R0 Gm42642-201ENSMUST00000200683 355 ntBASIC19.17■□□□□ 0.66
Lhx6Q9R1R0 Gm10493-201ENSMUST00000097270 612 ntBASIC19.17■□□□□ 0.66
Lhx6Q9R1R0 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Lhx6Q9R1R0 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Lhx6Q9R1R0 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Lhx6Q9R1R0 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lhx6Q9R1R0 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC19.16■□□□□ 0.66
Lhx6Q9R1R0 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC19.16■□□□□ 0.66
Lhx6Q9R1R0 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.16■□□□□ 0.66
Lhx6Q9R1R0 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Lhx6Q9R1R0 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lhx6Q9R1R0 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lhx6Q9R1R0 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Lhx6Q9R1R0 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
Lhx6Q9R1R0 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lhx6Q9R1R0 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Lhx6Q9R1R0 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC19.15■□□□□ 0.66
Lhx6Q9R1R0 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lhx6Q9R1R0 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.15■□□□□ 0.66
Lhx6Q9R1R0 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC19.15■□□□□ 0.66
Lhx6Q9R1R0 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC19.15■□□□□ 0.66
Lhx6Q9R1R0 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC19.15■□□□□ 0.66
Lhx6Q9R1R0 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC19.15■□□□□ 0.66
Lhx6Q9R1R0 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lhx6Q9R1R0 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Lhx6Q9R1R0 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Lhx6Q9R1R0 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Lhx6Q9R1R0 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Lhx6Q9R1R0 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC19.14■□□□□ 0.65
Lhx6Q9R1R0 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Lhx6Q9R1R0 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lhx6Q9R1R0 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.14■□□□□ 0.65
Lhx6Q9R1R0 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Lhx6Q9R1R0 Gm10849-201ENSMUST00000100397 618 ntBASIC19.13■□□□□ 0.65
Lhx6Q9R1R0 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lhx6Q9R1R0 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Lhx6Q9R1R0 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Lhx6Q9R1R0 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lhx6Q9R1R0 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Lhx6Q9R1R0 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms