Protein–RNA interactions for Protein: Q9R0W9

Chrna6, Neuronal acetylcholine receptor subunit alpha-6, mousemouse

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna6Q9R0W9 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC21.01■□□□□ 0.95
Chrna6Q9R0W9 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Chrna6Q9R0W9 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Chrna6Q9R0W9 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Chrna6Q9R0W9 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Chrna6Q9R0W9 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Chrna6Q9R0W9 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21■□□□□ 0.95
Chrna6Q9R0W9 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Chrna6Q9R0W9 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Chrna6Q9R0W9 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC21■□□□□ 0.95
Chrna6Q9R0W9 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC21■□□□□ 0.95
Chrna6Q9R0W9 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Chrna6Q9R0W9 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Chrna6Q9R0W9 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Chrna6Q9R0W9 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Chrna6Q9R0W9 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Chrna6Q9R0W9 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21■□□□□ 0.95
Chrna6Q9R0W9 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.99■□□□□ 0.95
Chrna6Q9R0W9 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.99■□□□□ 0.95
Chrna6Q9R0W9 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.99■□□□□ 0.95
Chrna6Q9R0W9 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Chrna6Q9R0W9 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.99■□□□□ 0.95
Chrna6Q9R0W9 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Chrna6Q9R0W9 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Chrna6Q9R0W9 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Chrna6Q9R0W9 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Chrna6Q9R0W9 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chrna6Q9R0W9 Gm7143-201ENSMUST00000222811 859 ntBASIC20.98■□□□□ 0.95
Chrna6Q9R0W9 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chrna6Q9R0W9 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chrna6Q9R0W9 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chrna6Q9R0W9 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Chrna6Q9R0W9 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Chrna6Q9R0W9 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
Chrna6Q9R0W9 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Chrna6Q9R0W9 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Chrna6Q9R0W9 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Chrna6Q9R0W9 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.97■□□□□ 0.95
Chrna6Q9R0W9 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.97■□□□□ 0.95
Chrna6Q9R0W9 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Chrna6Q9R0W9 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Chrna6Q9R0W9 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Chrna6Q9R0W9 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Chrna6Q9R0W9 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Chrna6Q9R0W9 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Chrna6Q9R0W9 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Chrna6Q9R0W9 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Chrna6Q9R0W9 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
Chrna6Q9R0W9 Gm9870-201ENSMUST00000063874 645 ntBASIC20.96■□□□□ 0.95
Chrna6Q9R0W9 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Chrna6Q9R0W9 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Chrna6Q9R0W9 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Chrna6Q9R0W9 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Chrna6Q9R0W9 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Chrna6Q9R0W9 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Chrna6Q9R0W9 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Chrna6Q9R0W9 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Chrna6Q9R0W9 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
Chrna6Q9R0W9 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Chrna6Q9R0W9 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Chrna6Q9R0W9 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Chrna6Q9R0W9 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Chrna6Q9R0W9 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Chrna6Q9R0W9 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
Chrna6Q9R0W9 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Chrna6Q9R0W9 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC20.94■□□□□ 0.94
Chrna6Q9R0W9 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Chrna6Q9R0W9 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Chrna6Q9R0W9 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.94■□□□□ 0.94
Chrna6Q9R0W9 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Chrna6Q9R0W9 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Chrna6Q9R0W9 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.93■□□□□ 0.94
Chrna6Q9R0W9 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Chrna6Q9R0W9 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Chrna6Q9R0W9 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Chrna6Q9R0W9 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Chrna6Q9R0W9 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Chrna6Q9R0W9 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Chrna6Q9R0W9 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.93■□□□□ 0.94
Chrna6Q9R0W9 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Chrna6Q9R0W9 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Chrna6Q9R0W9 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Chrna6Q9R0W9 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Chrna6Q9R0W9 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chrna6Q9R0W9 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chrna6Q9R0W9 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chrna6Q9R0W9 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chrna6Q9R0W9 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chrna6Q9R0W9 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chrna6Q9R0W9 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chrna6Q9R0W9 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chrna6Q9R0W9 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.92■□□□□ 0.94
Chrna6Q9R0W9 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Chrna6Q9R0W9 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.92■□□□□ 0.94
Chrna6Q9R0W9 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Chrna6Q9R0W9 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Chrna6Q9R0W9 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Chrna6Q9R0W9 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.91■□□□□ 0.94
Chrna6Q9R0W9 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Chrna6Q9R0W9 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms