Protein–RNA interactions for Protein: Q9JJK5

Herpud1, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herpud1Q9JJK5 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Herpud1Q9JJK5 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Herpud1Q9JJK5 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Herpud1Q9JJK5 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Herpud1Q9JJK5 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Herpud1Q9JJK5 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Herpud1Q9JJK5 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Herpud1Q9JJK5 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Herpud1Q9JJK5 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Herpud1Q9JJK5 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Herpud1Q9JJK5 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Herpud1Q9JJK5 Gm11847-201ENSMUST00000125165 1119 ntBASIC17.11■□□□□ 0.33
Herpud1Q9JJK5 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Herpud1Q9JJK5 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Herpud1Q9JJK5 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
Herpud1Q9JJK5 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Herpud1Q9JJK5 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Herpud1Q9JJK5 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17.11■□□□□ 0.33
Herpud1Q9JJK5 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Herpud1Q9JJK5 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Herpud1Q9JJK5 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Herpud1Q9JJK5 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.1■□□□□ 0.33
Herpud1Q9JJK5 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Herpud1Q9JJK5 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Herpud1Q9JJK5 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC17.1■□□□□ 0.33
Herpud1Q9JJK5 Gm28536-201ENSMUST00000190971 1317 ntBASIC17.1■□□□□ 0.33
Herpud1Q9JJK5 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Herpud1Q9JJK5 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Herpud1Q9JJK5 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Herpud1Q9JJK5 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Herpud1Q9JJK5 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Herpud1Q9JJK5 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Herpud1Q9JJK5 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
Herpud1Q9JJK5 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Herpud1Q9JJK5 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Herpud1Q9JJK5 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Herpud1Q9JJK5 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Herpud1Q9JJK5 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Herpud1Q9JJK5 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Herpud1Q9JJK5 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
Herpud1Q9JJK5 Gm8093-201ENSMUST00000128935 1892 ntBASIC17.08■□□□□ 0.33
Herpud1Q9JJK5 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Herpud1Q9JJK5 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Herpud1Q9JJK5 Gm5913-201ENSMUST00000119397 1399 ntBASIC17.08■□□□□ 0.32
Herpud1Q9JJK5 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Herpud1Q9JJK5 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Herpud1Q9JJK5 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Herpud1Q9JJK5 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC17.08■□□□□ 0.32
Herpud1Q9JJK5 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC17.08■□□□□ 0.32
Herpud1Q9JJK5 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Herpud1Q9JJK5 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Herpud1Q9JJK5 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Herpud1Q9JJK5 Cap2-205ENSMUST00000225824 1634 ntBASIC17.07■□□□□ 0.32
Herpud1Q9JJK5 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Herpud1Q9JJK5 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Herpud1Q9JJK5 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Herpud1Q9JJK5 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Herpud1Q9JJK5 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Herpud1Q9JJK5 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Herpud1Q9JJK5 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Herpud1Q9JJK5 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Herpud1Q9JJK5 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC17.07■□□□□ 0.32
Herpud1Q9JJK5 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Herpud1Q9JJK5 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Herpud1Q9JJK5 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Herpud1Q9JJK5 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC17.06■□□□□ 0.32
Herpud1Q9JJK5 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Herpud1Q9JJK5 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Herpud1Q9JJK5 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Herpud1Q9JJK5 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Herpud1Q9JJK5 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Herpud1Q9JJK5 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Herpud1Q9JJK5 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Herpud1Q9JJK5 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Herpud1Q9JJK5 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Herpud1Q9JJK5 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Herpud1Q9JJK5 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Herpud1Q9JJK5 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Herpud1Q9JJK5 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Herpud1Q9JJK5 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Herpud1Q9JJK5 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Herpud1Q9JJK5 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Herpud1Q9JJK5 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC17.05■□□□□ 0.32
Herpud1Q9JJK5 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Herpud1Q9JJK5 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Herpud1Q9JJK5 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Herpud1Q9JJK5 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Herpud1Q9JJK5 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Herpud1Q9JJK5 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Herpud1Q9JJK5 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Herpud1Q9JJK5 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Herpud1Q9JJK5 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Herpud1Q9JJK5 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Herpud1Q9JJK5 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Herpud1Q9JJK5 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Herpud1Q9JJK5 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Herpud1Q9JJK5 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC17.04■□□□□ 0.32
Herpud1Q9JJK5 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Herpud1Q9JJK5 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Herpud1Q9JJK5 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 61.1 ms