Protein–RNA interactions for Protein: Q9D9Y8

Ssmem1, RIKEN cDNA 1700025E21, isoform CRA_b, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssmem1Q9D9Y8 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ssmem1Q9D9Y8 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Ssmem1Q9D9Y8 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ssmem1Q9D9Y8 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ssmem1Q9D9Y8 Gm43403-201ENSMUST00000198011 1786 ntBASIC17.86■□□□□ 0.45
Ssmem1Q9D9Y8 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ssmem1Q9D9Y8 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ssmem1Q9D9Y8 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ssmem1Q9D9Y8 Kdm3b-204ENSMUST00000224715 2032 ntBASIC17.86■□□□□ 0.45
Ssmem1Q9D9Y8 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ssmem1Q9D9Y8 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ssmem1Q9D9Y8 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC17.85■□□□□ 0.45
Ssmem1Q9D9Y8 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ssmem1Q9D9Y8 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ssmem1Q9D9Y8 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC17.85■□□□□ 0.45
Ssmem1Q9D9Y8 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ssmem1Q9D9Y8 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ssmem1Q9D9Y8 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ssmem1Q9D9Y8 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ssmem1Q9D9Y8 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ssmem1Q9D9Y8 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Ssmem1Q9D9Y8 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ssmem1Q9D9Y8 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC17.84■□□□□ 0.45
Ssmem1Q9D9Y8 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Ssmem1Q9D9Y8 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
Ssmem1Q9D9Y8 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ssmem1Q9D9Y8 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ssmem1Q9D9Y8 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ssmem1Q9D9Y8 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Ssmem1Q9D9Y8 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC17.83■□□□□ 0.45
Ssmem1Q9D9Y8 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC17.83■□□□□ 0.45
Ssmem1Q9D9Y8 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ssmem1Q9D9Y8 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Ssmem1Q9D9Y8 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC17.83■□□□□ 0.44
Ssmem1Q9D9Y8 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ssmem1Q9D9Y8 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Ssmem1Q9D9Y8 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ssmem1Q9D9Y8 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ssmem1Q9D9Y8 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ssmem1Q9D9Y8 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ssmem1Q9D9Y8 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ssmem1Q9D9Y8 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ssmem1Q9D9Y8 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ssmem1Q9D9Y8 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ssmem1Q9D9Y8 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ssmem1Q9D9Y8 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ssmem1Q9D9Y8 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ssmem1Q9D9Y8 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ssmem1Q9D9Y8 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ssmem1Q9D9Y8 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ssmem1Q9D9Y8 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC17.81■□□□□ 0.44
Ssmem1Q9D9Y8 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC17.81■□□□□ 0.44
Ssmem1Q9D9Y8 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC17.81■□□□□ 0.44
Ssmem1Q9D9Y8 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC17.81■□□□□ 0.44
Ssmem1Q9D9Y8 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ssmem1Q9D9Y8 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ssmem1Q9D9Y8 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ssmem1Q9D9Y8 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ssmem1Q9D9Y8 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC17.81■□□□□ 0.44
Ssmem1Q9D9Y8 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Ssmem1Q9D9Y8 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ssmem1Q9D9Y8 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ssmem1Q9D9Y8 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ssmem1Q9D9Y8 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ssmem1Q9D9Y8 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC17.8■□□□□ 0.44
Ssmem1Q9D9Y8 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ssmem1Q9D9Y8 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Ssmem1Q9D9Y8 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Ssmem1Q9D9Y8 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ssmem1Q9D9Y8 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC17.78■□□□□ 0.44
Ssmem1Q9D9Y8 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ssmem1Q9D9Y8 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ssmem1Q9D9Y8 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Ssmem1Q9D9Y8 Gm12922-201ENSMUST00000120626 809 ntBASIC17.78■□□□□ 0.44
Ssmem1Q9D9Y8 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ssmem1Q9D9Y8 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ssmem1Q9D9Y8 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ssmem1Q9D9Y8 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ssmem1Q9D9Y8 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ssmem1Q9D9Y8 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ssmem1Q9D9Y8 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC17.77■□□□□ 0.44
Ssmem1Q9D9Y8 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC17.77■□□□□ 0.44
Ssmem1Q9D9Y8 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ssmem1Q9D9Y8 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ssmem1Q9D9Y8 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ssmem1Q9D9Y8 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Ssmem1Q9D9Y8 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC17.77■□□□□ 0.44
Ssmem1Q9D9Y8 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
Ssmem1Q9D9Y8 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ssmem1Q9D9Y8 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ssmem1Q9D9Y8 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ssmem1Q9D9Y8 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ssmem1Q9D9Y8 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ssmem1Q9D9Y8 Gm9870-201ENSMUST00000063874 645 ntBASIC17.76■□□□□ 0.43
Ssmem1Q9D9Y8 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC17.76■□□□□ 0.43
Ssmem1Q9D9Y8 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ssmem1Q9D9Y8 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ssmem1Q9D9Y8 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ssmem1Q9D9Y8 Gm5913-201ENSMUST00000119397 1399 ntBASIC17.76■□□□□ 0.43
Ssmem1Q9D9Y8 Dmtn-209ENSMUST00000228295 2572 ntBASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 12.8 ms