Protein–RNA interactions for Protein: Q9CR78

Msantd3, Myb/SANT-like DNA-binding domain-containing protein 3, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msantd3Q9CR78 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Msantd3Q9CR78 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Msantd3Q9CR78 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Msantd3Q9CR78 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Msantd3Q9CR78 Gm18284-201ENSMUST00000172604 624 ntBASIC19.83■□□□□ 0.77
Msantd3Q9CR78 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Msantd3Q9CR78 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Msantd3Q9CR78 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Msantd3Q9CR78 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Msantd3Q9CR78 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Msantd3Q9CR78 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.83■□□□□ 0.76
Msantd3Q9CR78 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Msantd3Q9CR78 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Msantd3Q9CR78 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Msantd3Q9CR78 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Msantd3Q9CR78 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Msantd3Q9CR78 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Msantd3Q9CR78 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Msantd3Q9CR78 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Msantd3Q9CR78 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.81■□□□□ 0.76
Msantd3Q9CR78 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
Msantd3Q9CR78 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19.81■□□□□ 0.76
Msantd3Q9CR78 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.81■□□□□ 0.76
Msantd3Q9CR78 Gm43137-201ENSMUST00000198052 594 ntBASIC19.81■□□□□ 0.76
Msantd3Q9CR78 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.81■□□□□ 0.76
Msantd3Q9CR78 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Msantd3Q9CR78 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Msantd3Q9CR78 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC19.8■□□□□ 0.76
Msantd3Q9CR78 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Msantd3Q9CR78 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Msantd3Q9CR78 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Msantd3Q9CR78 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.8■□□□□ 0.76
Msantd3Q9CR78 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.8■□□□□ 0.76
Msantd3Q9CR78 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC19.8■□□□□ 0.76
Msantd3Q9CR78 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Msantd3Q9CR78 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Msantd3Q9CR78 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Msantd3Q9CR78 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Msantd3Q9CR78 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Msantd3Q9CR78 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.79■□□□□ 0.76
Msantd3Q9CR78 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Msantd3Q9CR78 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Msantd3Q9CR78 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.79■□□□□ 0.76
Msantd3Q9CR78 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Msantd3Q9CR78 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC19.79■□□□□ 0.76
Msantd3Q9CR78 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.79■□□□□ 0.76
Msantd3Q9CR78 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.79■□□□□ 0.76
Msantd3Q9CR78 Gm7143-201ENSMUST00000222811 859 ntBASIC19.79■□□□□ 0.76
Msantd3Q9CR78 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Msantd3Q9CR78 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Msantd3Q9CR78 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Msantd3Q9CR78 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Msantd3Q9CR78 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
Msantd3Q9CR78 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Msantd3Q9CR78 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Msantd3Q9CR78 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Msantd3Q9CR78 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Msantd3Q9CR78 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Msantd3Q9CR78 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.77■□□□□ 0.76
Msantd3Q9CR78 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Msantd3Q9CR78 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Msantd3Q9CR78 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
Msantd3Q9CR78 Gm8770-201ENSMUST00000121113 1109 ntBASIC19.77■□□□□ 0.76
Msantd3Q9CR78 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Msantd3Q9CR78 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.77■□□□□ 0.76
Msantd3Q9CR78 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC19.77■□□□□ 0.76
Msantd3Q9CR78 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.77■□□□□ 0.76
Msantd3Q9CR78 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Msantd3Q9CR78 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Msantd3Q9CR78 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Msantd3Q9CR78 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Msantd3Q9CR78 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Msantd3Q9CR78 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Msantd3Q9CR78 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Msantd3Q9CR78 Mir7075-201ENSMUST00000184187 82 ntBASIC19.76■□□□□ 0.75
Msantd3Q9CR78 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.76■□□□□ 0.75
Msantd3Q9CR78 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Msantd3Q9CR78 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Msantd3Q9CR78 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Msantd3Q9CR78 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Msantd3Q9CR78 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Msantd3Q9CR78 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Msantd3Q9CR78 Slc35b2-207ENSMUST00000226086 850 ntBASIC19.75■□□□□ 0.75
Msantd3Q9CR78 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Msantd3Q9CR78 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Msantd3Q9CR78 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Msantd3Q9CR78 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Msantd3Q9CR78 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
Msantd3Q9CR78 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Msantd3Q9CR78 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Msantd3Q9CR78 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.74■□□□□ 0.75
Msantd3Q9CR78 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
Msantd3Q9CR78 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Msantd3Q9CR78 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Msantd3Q9CR78 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.74■□□□□ 0.75
Msantd3Q9CR78 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Msantd3Q9CR78 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.74■□□□□ 0.75
Msantd3Q9CR78 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.74■□□□□ 0.75
Msantd3Q9CR78 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Msantd3Q9CR78 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms