Protein–RNA interactions for Protein: Q9CR55

UPF0547 protein C16orf87 homolog, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CR55 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Q9CR55 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC18.94■□□□□ 0.62
Q9CR55 Gm14121-201ENSMUST00000121441 1380 ntBASIC18.94■□□□□ 0.62
Q9CR55 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Q9CR55 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.94■□□□□ 0.62
Q9CR55 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Q9CR55 AC131739.1-201ENSMUST00000221692 1245 ntBASIC18.94■□□□□ 0.62
Q9CR55 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Q9CR55 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Q9CR55 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Q9CR55 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Q9CR55 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Q9CR55 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Q9CR55 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Q9CR55 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Q9CR55 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Q9CR55 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC18.93■□□□□ 0.62
Q9CR55 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Q9CR55 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC18.93■□□□□ 0.62
Q9CR55 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.93■□□□□ 0.62
Q9CR55 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Q9CR55 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Q9CR55 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Q9CR55 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Q9CR55 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Q9CR55 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Q9CR55 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Q9CR55 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Q9CR55 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Q9CR55 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Q9CR55 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Q9CR55 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.92■□□□□ 0.62
Q9CR55 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Q9CR55 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Q9CR55 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Q9CR55 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Q9CR55 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.91■□□□□ 0.62
Q9CR55 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Q9CR55 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Q9CR55 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Q9CR55 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Q9CR55 Gm28731-201ENSMUST00000185564 1569 ntBASIC18.9■□□□□ 0.62
Q9CR55 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Q9CR55 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Q9CR55 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Q9CR55 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC18.9■□□□□ 0.62
Q9CR55 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Q9CR55 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Q9CR55 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC18.9■□□□□ 0.62
Q9CR55 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Q9CR55 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Q9CR55 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Q9CR55 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Q9CR55 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Q9CR55 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Q9CR55 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Q9CR55 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Q9CR55 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC18.89■□□□□ 0.61
Q9CR55 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.89■□□□□ 0.61
Q9CR55 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Q9CR55 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Q9CR55 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Q9CR55 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Q9CR55 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Q9CR55 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Q9CR55 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Q9CR55 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Q9CR55 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Q9CR55 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Q9CR55 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Q9CR55 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Q9CR55 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Q9CR55 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Q9CR55 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Q9CR55 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Q9CR55 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Q9CR55 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Q9CR55 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Q9CR55 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Q9CR55 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.86■□□□□ 0.61
Q9CR55 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Q9CR55 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Q9CR55 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Q9CR55 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Q9CR55 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Q9CR55 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Q9CR55 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Q9CR55 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Q9CR55 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Q9CR55 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Q9CR55 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Q9CR55 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Q9CR55 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Q9CR55 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Q9CR55 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Q9CR55 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Q9CR55 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.85■□□□□ 0.61
Q9CR55 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Q9CR55 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Q9CR55 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms