Protein–RNA interactions for Protein: Q99NI3

Gtf2ird2, General transcription factor II-I repeat domain-containing protein 2, mousemouse

Predictions only

Length 936 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2ird2Q99NI3 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gtf2ird2Q99NI3 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gtf2ird2Q99NI3 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gtf2ird2Q99NI3 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gtf2ird2Q99NI3 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gtf2ird2Q99NI3 Gm32051-202ENSMUST00000197905 2385 ntBASIC21.24■□□□□ 0.99
Gtf2ird2Q99NI3 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gtf2ird2Q99NI3 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gtf2ird2Q99NI3 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gtf2ird2Q99NI3 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Gtf2ird2Q99NI3 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gtf2ird2Q99NI3 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC21.23■□□□□ 0.99
Gtf2ird2Q99NI3 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC21.23■□□□□ 0.99
Gtf2ird2Q99NI3 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Gtf2ird2Q99NI3 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gtf2ird2Q99NI3 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Gtf2ird2Q99NI3 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC21.22■□□□□ 0.99
Gtf2ird2Q99NI3 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Gtf2ird2Q99NI3 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gtf2ird2Q99NI3 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Gtf2ird2Q99NI3 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gtf2ird2Q99NI3 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gtf2ird2Q99NI3 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gtf2ird2Q99NI3 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC21.21■□□□□ 0.99
Gtf2ird2Q99NI3 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gtf2ird2Q99NI3 Gm12922-201ENSMUST00000120626 809 ntBASIC21.21■□□□□ 0.99
Gtf2ird2Q99NI3 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC21.21■□□□□ 0.99
Gtf2ird2Q99NI3 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC21.21■□□□□ 0.99
Gtf2ird2Q99NI3 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Gtf2ird2Q99NI3 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC21.21■□□□□ 0.99
Gtf2ird2Q99NI3 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Gtf2ird2Q99NI3 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gtf2ird2Q99NI3 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gtf2ird2Q99NI3 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC21.2■□□□□ 0.98
Gtf2ird2Q99NI3 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC21.2■□□□□ 0.98
Gtf2ird2Q99NI3 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Gtf2ird2Q99NI3 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gtf2ird2Q99NI3 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Gtf2ird2Q99NI3 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gtf2ird2Q99NI3 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Gtf2ird2Q99NI3 AC164883.3-201ENSMUST00000227396 1774 ntBASIC21.2■□□□□ 0.98
Gtf2ird2Q99NI3 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gtf2ird2Q99NI3 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Gtf2ird2Q99NI3 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Gtf2ird2Q99NI3 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Gtf2ird2Q99NI3 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Gtf2ird2Q99NI3 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Gtf2ird2Q99NI3 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Gtf2ird2Q99NI3 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.19■□□□□ 0.98
Gtf2ird2Q99NI3 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Gtf2ird2Q99NI3 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Gtf2ird2Q99NI3 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Gtf2ird2Q99NI3 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.18■□□□□ 0.98
Gtf2ird2Q99NI3 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Gtf2ird2Q99NI3 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Gtf2ird2Q99NI3 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Gtf2ird2Q99NI3 Gm9847-201ENSMUST00000052528 599 ntBASIC21.18■□□□□ 0.98
Gtf2ird2Q99NI3 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Gtf2ird2Q99NI3 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Gtf2ird2Q99NI3 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Gtf2ird2Q99NI3 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Gtf2ird2Q99NI3 Gm4430-201ENSMUST00000192413 1943 ntBASIC21.17■□□□□ 0.98
Gtf2ird2Q99NI3 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gtf2ird2Q99NI3 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Gtf2ird2Q99NI3 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Gtf2ird2Q99NI3 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC21.17■□□□□ 0.98
Gtf2ird2Q99NI3 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Gtf2ird2Q99NI3 Gm13241-201ENSMUST00000094493 780 ntBASIC21.17■□□□□ 0.98
Gtf2ird2Q99NI3 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gtf2ird2Q99NI3 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gtf2ird2Q99NI3 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC21.17■□□□□ 0.98
Gtf2ird2Q99NI3 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gtf2ird2Q99NI3 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.17■□□□□ 0.98
Gtf2ird2Q99NI3 Kdm3b-204ENSMUST00000224715 2032 ntBASIC21.16■□□□□ 0.98
Gtf2ird2Q99NI3 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Gtf2ird2Q99NI3 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Gtf2ird2Q99NI3 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Gtf2ird2Q99NI3 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Gtf2ird2Q99NI3 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC21.15■□□□□ 0.98
Gtf2ird2Q99NI3 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Gtf2ird2Q99NI3 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Gtf2ird2Q99NI3 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Gtf2ird2Q99NI3 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Gtf2ird2Q99NI3 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Gtf2ird2Q99NI3 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Gtf2ird2Q99NI3 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Gtf2ird2Q99NI3 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Gtf2ird2Q99NI3 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Gtf2ird2Q99NI3 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Gtf2ird2Q99NI3 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Gtf2ird2Q99NI3 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Gtf2ird2Q99NI3 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC21.13■□□□□ 0.97
Gtf2ird2Q99NI3 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Gtf2ird2Q99NI3 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Gtf2ird2Q99NI3 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC21.13■□□□□ 0.97
Gtf2ird2Q99NI3 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Gtf2ird2Q99NI3 Gm37415-201ENSMUST00000192265 2054 ntBASIC21.13■□□□□ 0.97
Gtf2ird2Q99NI3 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC21.12■□□□□ 0.97
Gtf2ird2Q99NI3 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Gtf2ird2Q99NI3 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC21.12■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms