Protein–RNA interactions for Protein: Q99MS8

Tpgs1, Tubulin polyglutamylase complex subunit 1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpgs1Q99MS8 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Tpgs1Q99MS8 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Tpgs1Q99MS8 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Tpgs1Q99MS8 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Tpgs1Q99MS8 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Tpgs1Q99MS8 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC21.68■■□□□ 1.06
Tpgs1Q99MS8 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Tpgs1Q99MS8 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Tpgs1Q99MS8 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC21.68■■□□□ 1.06
Tpgs1Q99MS8 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21.68■■□□□ 1.06
Tpgs1Q99MS8 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Tpgs1Q99MS8 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Tpgs1Q99MS8 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Tpgs1Q99MS8 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Tpgs1Q99MS8 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Tpgs1Q99MS8 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Tpgs1Q99MS8 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Tpgs1Q99MS8 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Tpgs1Q99MS8 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Tpgs1Q99MS8 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC21.66■■□□□ 1.06
Tpgs1Q99MS8 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Tpgs1Q99MS8 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Tpgs1Q99MS8 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Tpgs1Q99MS8 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Tpgs1Q99MS8 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Tpgs1Q99MS8 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Tpgs1Q99MS8 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
Tpgs1Q99MS8 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Tpgs1Q99MS8 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC21.65■■□□□ 1.06
Tpgs1Q99MS8 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
Tpgs1Q99MS8 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC21.65■■□□□ 1.06
Tpgs1Q99MS8 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Tpgs1Q99MS8 Gm9870-201ENSMUST00000063874 645 ntBASIC21.65■■□□□ 1.06
Tpgs1Q99MS8 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Tpgs1Q99MS8 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
Tpgs1Q99MS8 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Tpgs1Q99MS8 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC21.64■■□□□ 1.05
Tpgs1Q99MS8 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC21.64■■□□□ 1.05
Tpgs1Q99MS8 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC21.64■■□□□ 1.05
Tpgs1Q99MS8 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.64■■□□□ 1.05
Tpgs1Q99MS8 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Tpgs1Q99MS8 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC21.63■■□□□ 1.05
Tpgs1Q99MS8 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Tpgs1Q99MS8 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Tpgs1Q99MS8 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Tpgs1Q99MS8 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Tpgs1Q99MS8 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Tpgs1Q99MS8 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
Tpgs1Q99MS8 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Tpgs1Q99MS8 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Tpgs1Q99MS8 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Tpgs1Q99MS8 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Tpgs1Q99MS8 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.62■■□□□ 1.05
Tpgs1Q99MS8 Gm12504-201ENSMUST00000120860 2231 ntBASIC21.61■■□□□ 1.05
Tpgs1Q99MS8 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Tpgs1Q99MS8 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
Tpgs1Q99MS8 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC21.61■■□□□ 1.05
Tpgs1Q99MS8 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Tpgs1Q99MS8 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Tpgs1Q99MS8 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC21.61■■□□□ 1.05
Tpgs1Q99MS8 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Tpgs1Q99MS8 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Tpgs1Q99MS8 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Tpgs1Q99MS8 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Tpgs1Q99MS8 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC21.59■■□□□ 1.05
Tpgs1Q99MS8 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Tpgs1Q99MS8 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Tpgs1Q99MS8 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Tpgs1Q99MS8 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
Tpgs1Q99MS8 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Tpgs1Q99MS8 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Tpgs1Q99MS8 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Tpgs1Q99MS8 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Tpgs1Q99MS8 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.58■■□□□ 1.05
Tpgs1Q99MS8 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Tpgs1Q99MS8 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Tpgs1Q99MS8 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Tpgs1Q99MS8 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Tpgs1Q99MS8 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Tpgs1Q99MS8 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Tpgs1Q99MS8 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC21.57■■□□□ 1.04
Tpgs1Q99MS8 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC21.57■■□□□ 1.04
Tpgs1Q99MS8 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Tpgs1Q99MS8 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Tpgs1Q99MS8 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Tpgs1Q99MS8 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Tpgs1Q99MS8 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Tpgs1Q99MS8 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC21.56■■□□□ 1.04
Tpgs1Q99MS8 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Tpgs1Q99MS8 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC21.56■■□□□ 1.04
Tpgs1Q99MS8 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC21.56■■□□□ 1.04
Tpgs1Q99MS8 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Tpgs1Q99MS8 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Tpgs1Q99MS8 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC21.56■■□□□ 1.04
Tpgs1Q99MS8 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Tpgs1Q99MS8 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC21.55■■□□□ 1.04
Tpgs1Q99MS8 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Tpgs1Q99MS8 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Tpgs1Q99MS8 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Tpgs1Q99MS8 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms