Protein–RNA interactions for Protein: Q91VA1

Slc44a4, Choline transporter-like protein 4, mousemouse

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc44a4Q91VA1 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Slc44a4Q91VA1 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Slc44a4Q91VA1 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Slc44a4Q91VA1 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC24.66■■□□□ 1.54
Slc44a4Q91VA1 Flvcr1-202ENSMUST00000191946 1216 ntBASIC24.66■■□□□ 1.54
Slc44a4Q91VA1 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Slc44a4Q91VA1 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Slc44a4Q91VA1 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Slc44a4Q91VA1 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC24.65■■□□□ 1.54
Slc44a4Q91VA1 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
Slc44a4Q91VA1 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Slc44a4Q91VA1 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Slc44a4Q91VA1 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Slc44a4Q91VA1 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC24.65■■□□□ 1.54
Slc44a4Q91VA1 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC24.65■■□□□ 1.54
Slc44a4Q91VA1 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
Slc44a4Q91VA1 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC24.65■■□□□ 1.54
Slc44a4Q91VA1 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC24.65■■□□□ 1.54
Slc44a4Q91VA1 Gm43173-201ENSMUST00000202246 593 ntBASIC24.64■■□□□ 1.54
Slc44a4Q91VA1 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Slc44a4Q91VA1 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC24.64■■□□□ 1.53
Slc44a4Q91VA1 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Slc44a4Q91VA1 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Slc44a4Q91VA1 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC24.63■■□□□ 1.53
Slc44a4Q91VA1 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Slc44a4Q91VA1 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC24.62■■□□□ 1.53
Slc44a4Q91VA1 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
Slc44a4Q91VA1 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Slc44a4Q91VA1 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC24.62■■□□□ 1.53
Slc44a4Q91VA1 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC24.62■■□□□ 1.53
Slc44a4Q91VA1 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Slc44a4Q91VA1 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Slc44a4Q91VA1 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC24.62■■□□□ 1.53
Slc44a4Q91VA1 Wdr70-203ENSMUST00000227371 1130 ntBASIC24.62■■□□□ 1.53
Slc44a4Q91VA1 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
Slc44a4Q91VA1 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Slc44a4Q91VA1 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Slc44a4Q91VA1 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Slc44a4Q91VA1 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
Slc44a4Q91VA1 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Slc44a4Q91VA1 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC24.61■■□□□ 1.53
Slc44a4Q91VA1 Gm5576-201ENSMUST00000075809 1236 ntBASIC24.61■■□□□ 1.53
Slc44a4Q91VA1 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC24.61■■□□□ 1.53
Slc44a4Q91VA1 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC24.61■■□□□ 1.53
Slc44a4Q91VA1 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Slc44a4Q91VA1 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC24.6■■□□□ 1.53
Slc44a4Q91VA1 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Slc44a4Q91VA1 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC24.6■■□□□ 1.53
Slc44a4Q91VA1 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Slc44a4Q91VA1 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Slc44a4Q91VA1 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
Slc44a4Q91VA1 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Slc44a4Q91VA1 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Slc44a4Q91VA1 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC24.59■■□□□ 1.53
Slc44a4Q91VA1 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Slc44a4Q91VA1 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC24.59■■□□□ 1.53
Slc44a4Q91VA1 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC24.59■■□□□ 1.53
Slc44a4Q91VA1 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Slc44a4Q91VA1 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Slc44a4Q91VA1 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
Slc44a4Q91VA1 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
Slc44a4Q91VA1 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
Slc44a4Q91VA1 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC24.57■■□□□ 1.52
Slc44a4Q91VA1 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Slc44a4Q91VA1 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Slc44a4Q91VA1 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC24.57■■□□□ 1.52
Slc44a4Q91VA1 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Slc44a4Q91VA1 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC24.56■■□□□ 1.52
Slc44a4Q91VA1 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC24.56■■□□□ 1.52
Slc44a4Q91VA1 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Slc44a4Q91VA1 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC24.56■■□□□ 1.52
Slc44a4Q91VA1 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Slc44a4Q91VA1 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Slc44a4Q91VA1 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Slc44a4Q91VA1 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Slc44a4Q91VA1 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Slc44a4Q91VA1 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Slc44a4Q91VA1 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC24.56■■□□□ 1.52
Slc44a4Q91VA1 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Slc44a4Q91VA1 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Slc44a4Q91VA1 AC166356.1-201ENSMUST00000228236 1426 ntBASIC24.55■■□□□ 1.52
Slc44a4Q91VA1 Gm43759-201ENSMUST00000196925 1261 ntBASIC24.55■■□□□ 1.52
Slc44a4Q91VA1 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC24.55■■□□□ 1.52
Slc44a4Q91VA1 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Slc44a4Q91VA1 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC24.55■■□□□ 1.52
Slc44a4Q91VA1 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Slc44a4Q91VA1 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC24.54■■□□□ 1.52
Slc44a4Q91VA1 Gm6085-201ENSMUST00000182774 1470 ntBASIC24.54■■□□□ 1.52
Slc44a4Q91VA1 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Slc44a4Q91VA1 Gm43530-201ENSMUST00000195920 274 ntBASIC24.54■■□□□ 1.52
Slc44a4Q91VA1 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
Slc44a4Q91VA1 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Slc44a4Q91VA1 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Slc44a4Q91VA1 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Slc44a4Q91VA1 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC24.54■■□□□ 1.52
Slc44a4Q91VA1 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Slc44a4Q91VA1 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Slc44a4Q91VA1 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Slc44a4Q91VA1 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Slc44a4Q91VA1 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC24.53■■□□□ 1.52
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms