Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rpa1Q8VEE4 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rpa1Q8VEE4 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Rpa1Q8VEE4 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Rpa1Q8VEE4 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC20.73■□□□□ 0.91
Rpa1Q8VEE4 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Rpa1Q8VEE4 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rpa1Q8VEE4 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rpa1Q8VEE4 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.72■□□□□ 0.91
Rpa1Q8VEE4 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rpa1Q8VEE4 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Rpa1Q8VEE4 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rpa1Q8VEE4 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC20.72■□□□□ 0.91
Rpa1Q8VEE4 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Rpa1Q8VEE4 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rpa1Q8VEE4 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Rpa1Q8VEE4 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rpa1Q8VEE4 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.71■□□□□ 0.91
Rpa1Q8VEE4 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rpa1Q8VEE4 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rpa1Q8VEE4 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.71■□□□□ 0.91
Rpa1Q8VEE4 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rpa1Q8VEE4 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rpa1Q8VEE4 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.71■□□□□ 0.91
Rpa1Q8VEE4 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rpa1Q8VEE4 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
Rpa1Q8VEE4 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Rpa1Q8VEE4 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Rpa1Q8VEE4 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rpa1Q8VEE4 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rpa1Q8VEE4 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rpa1Q8VEE4 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Rpa1Q8VEE4 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rpa1Q8VEE4 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Rpa1Q8VEE4 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rpa1Q8VEE4 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rpa1Q8VEE4 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Rpa1Q8VEE4 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rpa1Q8VEE4 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rpa1Q8VEE4 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rpa1Q8VEE4 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rpa1Q8VEE4 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rpa1Q8VEE4 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rpa1Q8VEE4 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.69■□□□□ 0.9
Rpa1Q8VEE4 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rpa1Q8VEE4 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rpa1Q8VEE4 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rpa1Q8VEE4 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rpa1Q8VEE4 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
Rpa1Q8VEE4 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rpa1Q8VEE4 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rpa1Q8VEE4 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC20.68■□□□□ 0.9
Rpa1Q8VEE4 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC20.68■□□□□ 0.9
Rpa1Q8VEE4 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC20.68■□□□□ 0.9
Rpa1Q8VEE4 Gm6311-201ENSMUST00000073790 878 ntBASIC20.68■□□□□ 0.9
Rpa1Q8VEE4 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.68■□□□□ 0.9
Rpa1Q8VEE4 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Rpa1Q8VEE4 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rpa1Q8VEE4 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.67■□□□□ 0.9
Rpa1Q8VEE4 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Rpa1Q8VEE4 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rpa1Q8VEE4 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.66■□□□□ 0.9
Rpa1Q8VEE4 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rpa1Q8VEE4 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC20.66■□□□□ 0.9
Rpa1Q8VEE4 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rpa1Q8VEE4 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rpa1Q8VEE4 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rpa1Q8VEE4 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Rpa1Q8VEE4 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rpa1Q8VEE4 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rpa1Q8VEE4 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rpa1Q8VEE4 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rpa1Q8VEE4 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.65■□□□□ 0.9
Rpa1Q8VEE4 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rpa1Q8VEE4 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.65■□□□□ 0.9
Rpa1Q8VEE4 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Rpa1Q8VEE4 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
Rpa1Q8VEE4 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Rpa1Q8VEE4 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rpa1Q8VEE4 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rpa1Q8VEE4 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.64■□□□□ 0.89
Rpa1Q8VEE4 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Rpa1Q8VEE4 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Rpa1Q8VEE4 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Rpa1Q8VEE4 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rpa1Q8VEE4 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Rpa1Q8VEE4 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Rpa1Q8VEE4 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rpa1Q8VEE4 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rpa1Q8VEE4 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rpa1Q8VEE4 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rpa1Q8VEE4 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rpa1Q8VEE4 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Rpa1Q8VEE4 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rpa1Q8VEE4 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rpa1Q8VEE4 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Rpa1Q8VEE4 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rpa1Q8VEE4 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rpa1Q8VEE4 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rpa1Q8VEE4 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 1642.9 ms