Protein–RNA interactions for Protein: Q8VDP2

UPF0428 protein CXorf56 homolog, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8VDP2 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Q8VDP2 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Q8VDP2 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Q8VDP2 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Q8VDP2 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Q8VDP2 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC20.02■□□□□ 0.8
Q8VDP2 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC20.02■□□□□ 0.8
Q8VDP2 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Q8VDP2 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Q8VDP2 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Q8VDP2 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Q8VDP2 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Q8VDP2 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Q8VDP2 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Q8VDP2 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Q8VDP2 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Q8VDP2 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Q8VDP2 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Q8VDP2 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC20■□□□□ 0.79
Q8VDP2 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC20■□□□□ 0.79
Q8VDP2 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Q8VDP2 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Q8VDP2 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Q8VDP2 Fam105a-203ENSMUST00000226170 3043 ntBASIC20■□□□□ 0.79
Q8VDP2 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Q8VDP2 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Q8VDP2 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Q8VDP2 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Q8VDP2 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Q8VDP2 Golph3-205ENSMUST00000228671 2842 ntBASIC19.99■□□□□ 0.79
Q8VDP2 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Q8VDP2 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Q8VDP2 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Q8VDP2 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Q8VDP2 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Q8VDP2 Ddx41-204ENSMUST00000224765 2199 ntBASIC19.99■□□□□ 0.79
Q8VDP2 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Q8VDP2 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
Q8VDP2 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Q8VDP2 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Q8VDP2 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Q8VDP2 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Q8VDP2 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Q8VDP2 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
Q8VDP2 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Q8VDP2 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Q8VDP2 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Q8VDP2 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Q8VDP2 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Q8VDP2 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Q8VDP2 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Q8VDP2 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Q8VDP2 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC19.97■□□□□ 0.79
Q8VDP2 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Q8VDP2 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Q8VDP2 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Q8VDP2 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Q8VDP2 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Q8VDP2 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Q8VDP2 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Q8VDP2 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Q8VDP2 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Q8VDP2 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Q8VDP2 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Q8VDP2 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Q8VDP2 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.96■□□□□ 0.79
Q8VDP2 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Q8VDP2 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Q8VDP2 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Q8VDP2 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Q8VDP2 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Q8VDP2 Gm43548-201ENSMUST00000197139 2353 ntBASIC19.95■□□□□ 0.78
Q8VDP2 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Q8VDP2 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Q8VDP2 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Q8VDP2 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Q8VDP2 Gm42809-201ENSMUST00000198429 1138 ntBASIC19.95■□□□□ 0.78
Q8VDP2 Nkain2-201ENSMUST00000092602 558 ntBASIC19.95■□□□□ 0.78
Q8VDP2 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Q8VDP2 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Q8VDP2 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Q8VDP2 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Q8VDP2 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Q8VDP2 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Q8VDP2 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Q8VDP2 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Q8VDP2 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
Q8VDP2 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC19.94■□□□□ 0.78
Q8VDP2 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Q8VDP2 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
Q8VDP2 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Q8VDP2 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Q8VDP2 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Q8VDP2 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Q8VDP2 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Q8VDP2 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Q8VDP2 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Q8VDP2 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Q8VDP2 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
Q8VDP2 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms