Protein–RNA interactions for Protein: Q8R2C9

Vmn1r28, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r28Q8R2C9 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19■□□□□ 0.63
Vmn1r28Q8R2C9 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vmn1r28Q8R2C9 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vmn1r28Q8R2C9 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vmn1r28Q8R2C9 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vmn1r28Q8R2C9 Gm22238-201ENSMUST00000175222 88 ntBASIC18.99■□□□□ 0.63
Vmn1r28Q8R2C9 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC18.99■□□□□ 0.63
Vmn1r28Q8R2C9 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Vmn1r28Q8R2C9 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Vmn1r28Q8R2C9 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vmn1r28Q8R2C9 Gm43403-201ENSMUST00000198011 1786 ntBASIC18.98■□□□□ 0.63
Vmn1r28Q8R2C9 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Vmn1r28Q8R2C9 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vmn1r28Q8R2C9 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC18.98■□□□□ 0.63
Vmn1r28Q8R2C9 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vmn1r28Q8R2C9 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vmn1r28Q8R2C9 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC18.98■□□□□ 0.63
Vmn1r28Q8R2C9 Dmtn-209ENSMUST00000228295 2572 ntBASIC18.98■□□□□ 0.63
Vmn1r28Q8R2C9 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC18.98■□□□□ 0.63
Vmn1r28Q8R2C9 Gm32051-202ENSMUST00000197905 2385 ntBASIC18.98■□□□□ 0.63
Vmn1r28Q8R2C9 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vmn1r28Q8R2C9 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vmn1r28Q8R2C9 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vmn1r28Q8R2C9 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vmn1r28Q8R2C9 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Vmn1r28Q8R2C9 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Vmn1r28Q8R2C9 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Vmn1r28Q8R2C9 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC18.97■□□□□ 0.63
Vmn1r28Q8R2C9 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC18.97■□□□□ 0.63
Vmn1r28Q8R2C9 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vmn1r28Q8R2C9 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Vmn1r28Q8R2C9 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vmn1r28Q8R2C9 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vmn1r28Q8R2C9 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Vmn1r28Q8R2C9 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Vmn1r28Q8R2C9 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC18.97■□□□□ 0.63
Vmn1r28Q8R2C9 Kdm3b-204ENSMUST00000224715 2032 ntBASIC18.96■□□□□ 0.63
Vmn1r28Q8R2C9 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Vmn1r28Q8R2C9 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Vmn1r28Q8R2C9 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vmn1r28Q8R2C9 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Vmn1r28Q8R2C9 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vmn1r28Q8R2C9 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vmn1r28Q8R2C9 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vmn1r28Q8R2C9 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Vmn1r28Q8R2C9 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC18.95■□□□□ 0.62
Vmn1r28Q8R2C9 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vmn1r28Q8R2C9 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vmn1r28Q8R2C9 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Vmn1r28Q8R2C9 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vmn1r28Q8R2C9 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC18.94■□□□□ 0.62
Vmn1r28Q8R2C9 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Vmn1r28Q8R2C9 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vmn1r28Q8R2C9 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vmn1r28Q8R2C9 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vmn1r28Q8R2C9 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vmn1r28Q8R2C9 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vmn1r28Q8R2C9 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Vmn1r28Q8R2C9 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vmn1r28Q8R2C9 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Vmn1r28Q8R2C9 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vmn1r28Q8R2C9 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC18.93■□□□□ 0.62
Vmn1r28Q8R2C9 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vmn1r28Q8R2C9 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.92■□□□□ 0.62
Vmn1r28Q8R2C9 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC18.92■□□□□ 0.62
Vmn1r28Q8R2C9 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vmn1r28Q8R2C9 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vmn1r28Q8R2C9 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vmn1r28Q8R2C9 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Vmn1r28Q8R2C9 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Vmn1r28Q8R2C9 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vmn1r28Q8R2C9 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vmn1r28Q8R2C9 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vmn1r28Q8R2C9 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vmn1r28Q8R2C9 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vmn1r28Q8R2C9 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vmn1r28Q8R2C9 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vmn1r28Q8R2C9 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC18.91■□□□□ 0.62
Vmn1r28Q8R2C9 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Vmn1r28Q8R2C9 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vmn1r28Q8R2C9 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Vmn1r28Q8R2C9 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Vmn1r28Q8R2C9 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Vmn1r28Q8R2C9 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Vmn1r28Q8R2C9 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Vmn1r28Q8R2C9 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Vmn1r28Q8R2C9 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Vmn1r28Q8R2C9 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Vmn1r28Q8R2C9 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Vmn1r28Q8R2C9 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Vmn1r28Q8R2C9 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Vmn1r28Q8R2C9 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Vmn1r28Q8R2C9 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC18.89■□□□□ 0.62
Vmn1r28Q8R2C9 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC18.89■□□□□ 0.61
Vmn1r28Q8R2C9 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC18.89■□□□□ 0.61
Vmn1r28Q8R2C9 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Vmn1r28Q8R2C9 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC18.89■□□□□ 0.61
Vmn1r28Q8R2C9 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Vmn1r28Q8R2C9 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Vmn1r28Q8R2C9 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 74.9 ms