Protein–RNA interactions for Protein: Q8R0W1

Cipc, CLOCK-interacting pacemaker, mousemouse

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CipcQ8R0W1 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CipcQ8R0W1 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CipcQ8R0W1 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CipcQ8R0W1 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CipcQ8R0W1 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CipcQ8R0W1 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.46■□□□□ 0.71
CipcQ8R0W1 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CipcQ8R0W1 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CipcQ8R0W1 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CipcQ8R0W1 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC19.46■□□□□ 0.71
CipcQ8R0W1 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.45■□□□□ 0.7
CipcQ8R0W1 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CipcQ8R0W1 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.45■□□□□ 0.7
CipcQ8R0W1 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC19.45■□□□□ 0.7
CipcQ8R0W1 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
CipcQ8R0W1 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CipcQ8R0W1 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CipcQ8R0W1 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CipcQ8R0W1 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CipcQ8R0W1 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CipcQ8R0W1 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.44■□□□□ 0.7
CipcQ8R0W1 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CipcQ8R0W1 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CipcQ8R0W1 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CipcQ8R0W1 Gm22238-201ENSMUST00000175222 88 ntBASIC19.44■□□□□ 0.7
CipcQ8R0W1 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CipcQ8R0W1 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CipcQ8R0W1 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CipcQ8R0W1 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CipcQ8R0W1 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CipcQ8R0W1 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CipcQ8R0W1 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CipcQ8R0W1 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CipcQ8R0W1 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CipcQ8R0W1 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CipcQ8R0W1 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CipcQ8R0W1 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CipcQ8R0W1 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.43■□□□□ 0.7
CipcQ8R0W1 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CipcQ8R0W1 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.43■□□□□ 0.7
CipcQ8R0W1 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.43■□□□□ 0.7
CipcQ8R0W1 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CipcQ8R0W1 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
CipcQ8R0W1 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CipcQ8R0W1 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CipcQ8R0W1 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CipcQ8R0W1 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CipcQ8R0W1 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CipcQ8R0W1 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.42■□□□□ 0.7
CipcQ8R0W1 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CipcQ8R0W1 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.42■□□□□ 0.7
CipcQ8R0W1 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CipcQ8R0W1 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CipcQ8R0W1 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CipcQ8R0W1 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CipcQ8R0W1 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.42■□□□□ 0.7
CipcQ8R0W1 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.42■□□□□ 0.7
CipcQ8R0W1 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
CipcQ8R0W1 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CipcQ8R0W1 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CipcQ8R0W1 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CipcQ8R0W1 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CipcQ8R0W1 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CipcQ8R0W1 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CipcQ8R0W1 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CipcQ8R0W1 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CipcQ8R0W1 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CipcQ8R0W1 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.41■□□□□ 0.7
CipcQ8R0W1 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CipcQ8R0W1 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CipcQ8R0W1 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CipcQ8R0W1 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CipcQ8R0W1 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CipcQ8R0W1 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CipcQ8R0W1 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.4■□□□□ 0.7
CipcQ8R0W1 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CipcQ8R0W1 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CipcQ8R0W1 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CipcQ8R0W1 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CipcQ8R0W1 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CipcQ8R0W1 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.39■□□□□ 0.7
CipcQ8R0W1 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CipcQ8R0W1 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CipcQ8R0W1 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.39■□□□□ 0.69
CipcQ8R0W1 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.39■□□□□ 0.69
CipcQ8R0W1 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.39■□□□□ 0.69
CipcQ8R0W1 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CipcQ8R0W1 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CipcQ8R0W1 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CipcQ8R0W1 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CipcQ8R0W1 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
CipcQ8R0W1 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
CipcQ8R0W1 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.38■□□□□ 0.69
CipcQ8R0W1 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CipcQ8R0W1 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CipcQ8R0W1 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CipcQ8R0W1 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
CipcQ8R0W1 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CipcQ8R0W1 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CipcQ8R0W1 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms