Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Ebf4Q8K4J2 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Ebf4Q8K4J2 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ebf4Q8K4J2 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ebf4Q8K4J2 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ebf4Q8K4J2 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ebf4Q8K4J2 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ebf4Q8K4J2 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ebf4Q8K4J2 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ebf4Q8K4J2 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ebf4Q8K4J2 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ebf4Q8K4J2 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ebf4Q8K4J2 Gm9939-201ENSMUST00000067161 1154 ntBASIC18.85■□□□□ 0.61
Ebf4Q8K4J2 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
Ebf4Q8K4J2 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
Ebf4Q8K4J2 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ebf4Q8K4J2 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Ebf4Q8K4J2 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ebf4Q8K4J2 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.84■□□□□ 0.61
Ebf4Q8K4J2 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ebf4Q8K4J2 AC154454.1-201ENSMUST00000225253 216 ntBASIC18.84■□□□□ 0.61
Ebf4Q8K4J2 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.84■□□□□ 0.61
Ebf4Q8K4J2 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ebf4Q8K4J2 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
Ebf4Q8K4J2 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ebf4Q8K4J2 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ebf4Q8K4J2 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ebf4Q8K4J2 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ebf4Q8K4J2 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ebf4Q8K4J2 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ebf4Q8K4J2 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Ebf4Q8K4J2 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
Ebf4Q8K4J2 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ebf4Q8K4J2 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.82■□□□□ 0.6
Ebf4Q8K4J2 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ebf4Q8K4J2 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ebf4Q8K4J2 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Ebf4Q8K4J2 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ebf4Q8K4J2 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ebf4Q8K4J2 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ebf4Q8K4J2 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ebf4Q8K4J2 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ebf4Q8K4J2 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ebf4Q8K4J2 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ebf4Q8K4J2 Gm6821-201ENSMUST00000107540 542 ntBASIC18.81■□□□□ 0.6
Ebf4Q8K4J2 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC18.81■□□□□ 0.6
Ebf4Q8K4J2 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ebf4Q8K4J2 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ebf4Q8K4J2 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ebf4Q8K4J2 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ebf4Q8K4J2 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ebf4Q8K4J2 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ebf4Q8K4J2 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ebf4Q8K4J2 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ebf4Q8K4J2 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ebf4Q8K4J2 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ebf4Q8K4J2 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Ebf4Q8K4J2 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ebf4Q8K4J2 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.8■□□□□ 0.6
Ebf4Q8K4J2 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ebf4Q8K4J2 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
Ebf4Q8K4J2 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ebf4Q8K4J2 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ebf4Q8K4J2 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ebf4Q8K4J2 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ebf4Q8K4J2 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ebf4Q8K4J2 Gm8093-201ENSMUST00000128935 1892 ntBASIC18.8■□□□□ 0.6
Ebf4Q8K4J2 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ebf4Q8K4J2 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ebf4Q8K4J2 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Ebf4Q8K4J2 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Ebf4Q8K4J2 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Ebf4Q8K4J2 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ebf4Q8K4J2 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC18.79■□□□□ 0.6
Ebf4Q8K4J2 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.79■□□□□ 0.6
Ebf4Q8K4J2 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ebf4Q8K4J2 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Ebf4Q8K4J2 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ebf4Q8K4J2 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ebf4Q8K4J2 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ebf4Q8K4J2 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ebf4Q8K4J2 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ebf4Q8K4J2 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ebf4Q8K4J2 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Ebf4Q8K4J2 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Ebf4Q8K4J2 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
Ebf4Q8K4J2 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ebf4Q8K4J2 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.77■□□□□ 0.6
Ebf4Q8K4J2 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Ebf4Q8K4J2 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ebf4Q8K4J2 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ebf4Q8K4J2 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ebf4Q8K4J2 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
Ebf4Q8K4J2 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ebf4Q8K4J2 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.77■□□□□ 0.6
Ebf4Q8K4J2 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ebf4Q8K4J2 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ebf4Q8K4J2 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Ebf4Q8K4J2 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ebf4Q8K4J2 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 113.7 ms